ncRNA ID | osa-miRf11163-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 24 |
Mature sequence(if miRNA) | NA - ACGGUCCUUAAGGAGGUACCAUGA - NA |
Stem-loop(if miRNA) |
   C       C       A              A      UUUUUU   -AU         -          GG   C GAG AAUUUUA GGUCCUU AGGAGGUACCAUGA GUAUCA      UCU   UGUAAAUUU GGUACCUCAU  UAC U ||| ||||||| ||||||| |||||||||||||| ||||||      |||   ||||||||| ||||||||||  ||| CUC UUAAGAU CCAGGAA UCCUCCAUGGUACU CAUGGU      AGA   ACAUUUAAA CCAUGGAGUG  AUG A    A       A       C              C      ---UUU   AUC         A          UA   G |
Stem-loop sequence | GAGCAAUUUUACGGUCCUUAAGGAGGUACCAUGAAGUAUCAUUUUUUUCUAUUGUAAAUUUGGUACCUCAUGGUACCUAGGUAAUGUGAGGUACCAAAAUUUACACUAAGAUUUUGGUACCUCAUGGUACCUCCUCAAGGACCAUAGAAUUACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289087.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090095K03, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288182.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence | NA | coding protein | psRNATarget |