Search result

BaseInfo

ncRNA ID novel_tse_miR36
Species Triadica sebifera
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 18
Mature sequence(if miRNA) 1959 - GGAGGGAAGCGAGAAGGA - 1976
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     --------     -GCC   CA   
  CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGAUACAAGAUUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACU        UCACU    UAA  CUGC
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    |||  |||C
  GAAGAGCGAAGGGAGGGCUAGUCUAGAUAGCGAAGUUAAGUGAAGCUCAACGUCUGGGAGUUUCAAACAAUCUUCUUUUUCUUCGUGAUCUUCUUUUUAAUCGUGAGACACUUAUACUCGAAGCAAACCGAGUCCUCCUAUAAAGUUUCAAUUUCUAACUUAAUGUCUUUGUCAGCCUAAAUGGCGUUCAACUUAAUUUACUCAGUUUCCGGCUACAAUGACAUUUACCUGAUCUAUAAGGUGUCUUUUCCUUCCUACAAGGAAAGAGACUGUACCCAGGAAACUUCCUAUUACUCGCAUCCCUAGAAUUAACACGACAUUUCCUUAUAAAUGAAUAUCGUCCUAUAGCCGAAUGACGAUACUGUAAGAUACUUCUCCAGUGUCUAGUCUUAAAUCUACUAACCGUCUUGUCCUGGCGUACACAAGGUCUACGGAACGCUGUAAUAAUGAUAGUUAUGGAAAGUAGGUGACGUCUCCGACGACUCCUCUUUUAACGGUACGAAGCCCUUUUACUUAGUAAUUUUUUACGUUUACUCUUUGACUUAUAACUUUUUCUUUAUAACAACUUUUUGUUUCUAAACCGACUAUUAGUUUAUUCACAUAAUUGAUUUAGGAAUCUUCGAGAAGUUUUUCUAGAAUUCCUCUCCCUCGUGGUCUAUGUUCUAAACUUCGUCAGAACCCUCGAGGUUUCUUUUCUUGAGUUACUAACGUCUCGACUUUAGUGAAGUAACUUUUACGUGUAGCUUCCUAUAGCAAGACCUUCUUCGUACUAUCGAUCACUAACACUAAGUUAAGUUAGGGUCAGGGUUCUAUUCGUGUUCCUUCUUUAUUACAGUAACGUCUACCUUUAUCUUUUCAACUUCCGUUUUCAGUGUCUUCGAUGUUUUGGACACCUAAGUCAGUUAGUACUCCUUCUCAGAGACGUCUGACUCCUUUUUCAACAACUCUAUCUAUUUCUACUUUGA        AGUGG    AUU  GACA
AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAUUACAG     GCCU   AC   
Stem-loop sequence CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGAUACAAGAUUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACUUCACUGCCUAACACUGCCACAGCAUUAUCCGGGUGAGACAUUACAGUUUCAUCUUUAUCUAUCUCAACAACUUUUUCCUCAGUCUGCAGAGACUCUUCCUCAUGAUUGACUGAAUCCACAGGUUUUGUAGCUUCUGUGACUUUUGCCUUCAACUUUUCUAUUUCCAUCUGCAAUGACAUUAUUUCUUCCUUGUGCUUAUCUUGGGACUGGGAUUGAAUUGAAUCACAAUCACUAGCUAUCAUGCUUCUUCCAGAACGAUAUCCUUCGAUGUGCAUUUUCAAUGAAGUGAUUUCAGCUCUGCAAUCAUUGAGUUCUUUUCUUUGGAGCUCCCAAGACUGCUUCAAAUCUUGUAUCUGGUGCUCCCUCUCCUUAAGAUCUUUUUGAAGAGCUUCUAAGGAUUUAGUUAAUACACUUAUUUGAUUAUCAGCCAAAUCUUUGUUUUUCAACAAUAUUUCUUUUUCAAUAUUCAGUUUCUCAUUUGCAUUUUUUAAUGAUUCAUUUUCCCGAAGCAUGGCAAUUUUCUCCUCAGCAGCCUCUGCAGUGGAUGAAAGGUAUUGAUAGUAAUAAUGUCGCAAGGCAUCUGGAACACAUGCGGUCCUGUUCUGCCAAUCAUCUAAAUUCUGAUCUGUGACCUCUUCAUAGAAUGUCAUAGCAGUAAGCCGAUAUCCUGCUAUAAGUAAAUAUUCCUUUACAGCACAAUUAAGAUCCCUACGCUCAUUAUCCUUCAAAGGACCCAUGUCAGAGAAAGGAACAUCCUUCCUUUUCUGUGGAAUAUCUAGUCCAUUUACAGUAACAUCGGCCUUUGACUCAUUUAAUUCAACUUGCGGUAAAUCCGACUGUUUCUGUAAUUCAAUCUUUAACUUUGAAAUAUCCUCCUGAGCCAAACGAAGCUCAUAUUCACAGAGUGCUAAUUUUUCUUCUAGUGCUUCUUUUUCUUCUAACAAACUUUGAGGGUCUGCAACUCGAAGUGAAUUGAAGCGAUAGAUCUGAUCGGGAGGGAAGCGAGAAGGA