ncRNA ID | novel_tse_miR36 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 18 |
Mature sequence(if miRNA) | 1959 - GGAGGGAAGCGAGAAGGA - 1976 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     --------     -GCC   CA      CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGAUACAAGAUUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACU        UCACU    UAA  CUGC   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    |||  |||C   GAAGAGCGAAGGGAGGGCUAGUCUAGAUAGCGAAGUUAAGUGAAGCUCAACGUCUGGGAGUUUCAAACAAUCUUCUUUUUCUUCGUGAUCUUCUUUUUAAUCGUGAGACACUUAUACUCGAAGCAAACCGAGUCCUCCUAUAAAGUUUCAAUUUCUAACUUAAUGUCUUUGUCAGCCUAAAUGGCGUUCAACUUAAUUUACUCAGUUUCCGGCUACAAUGACAUUUACCUGAUCUAUAAGGUGUCUUUUCCUUCCUACAAGGAAAGAGACUGUACCCAGGAAACUUCCUAUUACUCGCAUCCCUAGAAUUAACACGACAUUUCCUUAUAAAUGAAUAUCGUCCUAUAGCCGAAUGACGAUACUGUAAGAUACUUCUCCAGUGUCUAGUCUUAAAUCUACUAACCGUCUUGUCCUGGCGUACACAAGGUCUACGGAACGCUGUAAUAAUGAUAGUUAUGGAAAGUAGGUGACGUCUCCGACGACUCCUCUUUUAACGGUACGAAGCCCUUUUACUUAGUAAUUUUUUACGUUUACUCUUUGACUUAUAACUUUUUCUUUAUAACAACUUUUUGUUUCUAAACCGACUAUUAGUUUAUUCACAUAAUUGAUUUAGGAAUCUUCGAGAAGUUUUUCUAGAAUUCCUCUCCCUCGUGGUCUAUGUUCUAAACUUCGUCAGAACCCUCGAGGUUUCUUUUCUUGAGUUACUAACGUCUCGACUUUAGUGAAGUAACUUUUACGUGUAGCUUCCUAUAGCAAGACCUUCUUCGUACUAUCGAUCACUAACACUAAGUUAAGUUAGGGUCAGGGUUCUAUUCGUGUUCCUUCUUUAUUACAGUAACGUCUACCUUUAUCUUUUCAACUUCCGUUUUCAGUGUCUUCGAUGUUUUGGACACCUAAGUCAGUUAGUACUCCUUCUCAGAGACGUCUGACUCCUUUUUCAACAACUCUAUCUAUUUCUACUUUGA        AGUGG    AUU  GACA AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAUUACAG     GCCU   AC    |
Stem-loop sequence | CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGAUACAAGAUUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACUUCACUGCCUAACACUGCCACAGCAUUAUCCGGGUGAGACAUUACAGUUUCAUCUUUAUCUAUCUCAACAACUUUUUCCUCAGUCUGCAGAGACUCUUCCUCAUGAUUGACUGAAUCCACAGGUUUUGUAGCUUCUGUGACUUUUGCCUUCAACUUUUCUAUUUCCAUCUGCAAUGACAUUAUUUCUUCCUUGUGCUUAUCUUGGGACUGGGAUUGAAUUGAAUCACAAUCACUAGCUAUCAUGCUUCUUCCAGAACGAUAUCCUUCGAUGUGCAUUUUCAAUGAAGUGAUUUCAGCUCUGCAAUCAUUGAGUUCUUUUCUUUGGAGCUCCCAAGACUGCUUCAAAUCUUGUAUCUGGUGCUCCCUCUCCUUAAGAUCUUUUUGAAGAGCUUCUAAGGAUUUAGUUAAUACACUUAUUUGAUUAUCAGCCAAAUCUUUGUUUUUCAACAAUAUUUCUUUUUCAAUAUUCAGUUUCUCAUUUGCAUUUUUUAAUGAUUCAUUUUCCCGAAGCAUGGCAAUUUUCUCCUCAGCAGCCUCUGCAGUGGAUGAAAGGUAUUGAUAGUAAUAAUGUCGCAAGGCAUCUGGAACACAUGCGGUCCUGUUCUGCCAAUCAUCUAAAUUCUGAUCUGUGACCUCUUCAUAGAAUGUCAUAGCAGUAAGCCGAUAUCCUGCUAUAAGUAAAUAUUCCUUUACAGCACAAUUAAGAUCCCUACGCUCAUUAUCCUUCAAAGGACCCAUGUCAGAGAAAGGAACAUCCUUCCUUUUCUGUGGAAUAUCUAGUCCAUUUACAGUAACAUCGGCCUUUGACUCAUUUAAUUCAACUUGCGGUAAAUCCGACUGUUUCUGUAAUUCAAUCUUUAACUUUGAAAUAUCCUCCUGAGCCAAACGAAGCUCAUAUUCACAGAGUGCUAAUUUUUCUUCUAGUGCUUCUUUUUCUUCUAACAAACUUUGAGGGUCUGCAACUCGAAGUGAAUUGAAGCGAUAGAUCUGAUCGGGAGGGAAGCGAGAAGGA |