Search result

BaseInfo

ncRNA ID novel_tse_miR35
Species Triadica sebifera
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 18
Mature sequence(if miRNA) 1999 - GGAGGGAAGCGAGAAGGA - 2016
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         A  A     --   --   GAUA
  CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGUUCUUUUUCCAAUGCGUUGGAUACAAGACUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACU CA UGUCU  CAC  CCA    A
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |||  |||
  GAAGAGCGAAGGGAGGGCUAGUCUAGAUAGCGAAGUUAAGUGAAGCUCAACGUCUGGGAGUUUCAAACAAUCUUCUUUUUCUUCGUGAUCUUCUUUUUAAUCGUGAGACACUUAUACUCGAAGCAAACCGAGUCCUCCUAUAAAGUUUCAAUUUCUAACUUAAUGUCUUUGUCAGCCUAAAUGGCGUUCAACUUAAUUUACUCAGUUUCCGGCUACAAUGACAUUUACCUGAUCUAUAAGGUGUCUUUUCCUUCCUACAAGGAAAGAGACUGUACCCAGGAAACUUCCUAUUACUCGCAUCCCUAGAAUUAACACGACAUUUCCUUAUAAAUGAAUAUCGUCCUAUAGCCGAAUGACGAUACUGUAAGAUACUUCUCCAGUGUCUAGUCUUAAAUCUACUAACCGUCUUGUCCUGGCGUACACAAGGUCUACGGAACGCUGUAAUAAUGAUAGUUAUGGAAAGUAGGUGACGUCUCCGACGACUCCUCUUUUAACGGUACGAAGCCCUUUUACUUAGUAAUUUUUUACGUUUACUCUUUGACUUAUAACUUUUUCUUUAUAACAACUUUUUGUUUCUAAACCGACUAUUAGUUUAUUCACAUAAUUGAUUUAGGAAUCUUCGAGAAGUUUUUCUAGAAUUCCUCUCCCUCGUGGUCAAGAAAAAGGUUACGCAACCUAUGUUCUGAACUUCGUCAGAACCCUCGAGGUUUCUUUUCUUGAGUUACUAACGUCUCGACUUUAGUGAAGUAACUUUUACGUGUAGCUUCCUAUAGCAAGACCUUCUUCGUACUAUCGAUCACUAACACUAAGUUAAGUUAGGGUCAGGGUUCUAUUCGUGUUCCUUCUUUAUUACAGUAACGUCUACCUUUAUCUUUUCAACUUCCGUUUUCAGUGUCUUCGAUGUUUUGGACACCUAAGUCAGUUAGUACUCCUUCUCAGAGACGUCUGACUCCUUUUUCAACAACUCUAUCUAUUUCUACUUUGA GU ACGGA  GUG  GGU    U
AG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         A  G     UU   AC   AUCG
Stem-loop sequence CUUCUCGCUUCCCUCCCGAUCAGAUCUAUCGCUUCAAUUCACUUCGAGUUGCAGACCCUCAAAGUUUGUUAGAAGAAAAAGAAGCACUAGAAGAAAAAUUAGCACUCUGUGAAUAUGAGCUUCGUUUGGCUCAGGAGGAUAUUUCAAAGUUAAAGAUUGAAUUACAGAAACAGUCGGAUUUACCGCAAGUUGAAUUAAAUGAGUCAAAGGCCGAUGUUACUGUAAAUGGACUAGAUAUUCCACAGAAAAGGAAGGAUGUUCCUUUCUCUGACAUGGGUCCUUUGAAGGAUAAUGAGCGUAGGGAUCUUAAUUGUGCUGUAAAGGAAUAUUUACUUAUAGCAGGAUAUCGGCUUACUGCUAUGACAUUCUAUGAAGAGGUCACAGAUCAGAAUUUAGAUGAUUGGCAGAACAGGACCGCAUGUGUUCCAGAUGCCUUGCGACAUUAUUACUAUCAAUACCUUUCAUCCACUGCAGAGGCUGCUGAGGAGAAAAUUGCCAUGCUUCGGGAAAAUGAAUCAUUAAAAAAUGCAAAUGAGAAACUGAAUAUUGAAAAAGAAAUAUUGUUGAAAAACAAAGAUUUGGCUGAUAAUCAAAUAAGUGUAUUAACUAAAUCCUUAGAAGCUCUUCAAAAAGAUCUUAAGGAGAGGGAGCACCAGUUCUUUUUCCAAUGCGUUGGAUACAAGACUUGAAGCAGUCUUGGGAGCUCCAAAGAAAAGAACUCAAUGAUUGCAGAGCUGAAAUCACUUCAUUGAAAAUGCACAUCGAAGGAUAUCGUUCUGGAAGAAGCAUGAUAGCUAGUGAUUGUGAUUCAAUUCAAUCCCAGUCCCAAGAUAAGCACAAGGAAGAAAUAAUGUCAUUGCAGAUGGAAAUAGAAAAGUUGAAGGCAAAAGUCACAGAAGCUACAAAACCUGUGGAUUCAGUCAAUCAUGAGGAAGAGUCUCUGCAGACUGAGGAAAAAGUUGUUGAGAUAGAUAAAGAUGAAACUACAAUGUCUCACCCAGAUAAUGCUAUGGCAGUGUUAGGCAGUGAAGUUUCAUCUUUAUCUAUCUCAACAACUUUUUCCUCAGUCUGCAGAGACUCUUCCUCAUGAUUGACUGAAUCCACAGGUUUUGUAGCUUCUGUGACUUUUGCCUUCAACUUUUCUAUUUCCAUCUGCAAUGACAUUAUUUCUUCCUUGUGCUUAUCUUGGGACUGGGAUUGAAUUGAAUCACAAUCACUAGCUAUCAUGCUUCUUCCAGAACGAUAUCCUUCGAUGUGCAUUUUCAAUGAAGUGAUUUCAGCUCUGCAAUCAUUGAGUUCUUUUCUUUGGAGCUCCCAAGACUGCUUCAAGUCUUGUAUCCAACGCAUUGGAAAAAGAACUGGUGCUCCCUCUCCUUAAGAUCUUUUUGAAGAGCUUCUAAGGAUUUAGUUAAUACACUUAUUUGAUUAUCAGCCAAAUCUUUGUUUUUCAACAAUAUUUCUUUUUCAAUAUUCAGUUUCUCAUUUGCAUUUUUUAAUGAUUCAUUUUCCCGAAGCAUGGCAAUUUUCUCCUCAGCAGCCUCUGCAGUGGAUGAAAGGUAUUGAUAGUAAUAAUGUCGCAAGGCAUCUGGAACACAUGCGGUCCUGUUCUGCCAAUCAUCUAAAUUCUGAUCUGUGACCUCUUCAUAGAAUGUCAUAGCAGUAAGCCGAUAUCCUGCUAUAAGUAAAUAUUCCUUUACAGCACAAUUAAGAUCCCUACGCUCAUUAUCCUUCAAAGGACCCAUGUCAGAGAAAGGAACAUCCUUCCUUUUCUGUGGAAUAUCUAGUCCAUUUACAGUAACAUCGGCCUUUGACUCAUUUAAUUCAACUUGCGGUAAAUCCGACUGUUUCUGUAAUUCAAUCUUUAACUUUGAAAUAUCCUCCUGAGCCAAACGAAGCUCAUAUUCACAGAGUGCUAAUUUUUCUUCUAGUGCUUCUUUUUCUUCUAACAAACUUUGAGGGUCUGCAACUCGAAGUGAAUUGAAGCGAUAGAUCUGAUCGGGAGGGAAGCGAGAAGGA