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BaseInfo

ncRNA ID novel_tse_miR29
Species Triadica sebifera
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 18
Mature sequence(if miRNA) 943 - GGAGGGAAGGGGAGGUGG - 960
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AU   ACA  UC
  ACCUCCCCUUCCCUCCGGUGGACUGCCUGGGACUCUAAAUUCUGAUGAGCCAAGAGACUUGGACUUGCCAUAUAAGAGCAGGUUUUUCCUGCAACCAAAAACCCCAUAUGAGGCAGCAGCAAGAGCCAAGGAAUCAGCUAAGGACAUUGUUAGUGUGAAGCAGAACAUAGACAAGAGAGCUUGGCCCUAUGUCAUCAAUGAUCUUCGCCUCAGGGCUGAGUAUCUUCGCUAUGAUCUCAACACUAUUAUCUCUGCUAAACCCAAAGAAGAGAAGAAGUCCCUCAAGGAACUCACUGGAAAGCUCUUUGCUGCCAUCAGUGGGCUGGAUCAUGCAGCCAAGAUUAAGAGUACCCCAGAGGCAGAGAAAUACUAUGCCCAGACUGUGUCUACUCUGAAUGAUGUUCUUGCUAAAAUUGGCUAAGAGAUUUCAAUUCAUGUAUUUUCUUGUAAACUUUGUUAAUUACUUU  GCA   CU  U
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   ||
  UGGAGGGGAAGGGAGGCCACCUGACGGACCCUGAGAUUUAAGACUACUCGGUUCUCUGAACCUGAACGGUAUAUUCUCGUCCAAAAAGGACGUUGGUUUUUGGGGUAUACUCCGUCGUCGUUCUCGGUUCCUUAGUCGAUUCCUGUAACAAUCACACUUCGUCUUGUAUCUGUUCUCUCGAACCGGGAUACAGUAGUUACUAGAAGCGGAGUCCCGACUCAUAGAAGCGAUACUAGAGUUGUGAUAAUAGAGACGAUUUGGGUUUCUUCUCUUCUUCAGGGAGUUCCUUGAGUGACCUUUCGAGAAACGACGGUAGUCACCCGACCUAGUACGUCGGUUCUAAUUCUCAUGGGGUCUCCGUCUCUUUAUGAUACGGGUCUGACACAGAUGAGACUUACUACAAGAACGAUUUUAACCGAUUCUCUAAAGUUAAGUACAUAAAAGAACAUUUGAAACAAUUAAUGAAA  CGU   GG  U
GG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AU   --C  UU
Stem-loop sequence ACCUCCCCUUCCCUCCGGUGGACUGCCUGGGACUCUAAAUUCUGAUGAGCCAAGAGACUUGGACUUGCCAUAUAAGAGCAGGUUUUUCCUGCAACCAAAAACCCCAUAUGAGGCAGCAGCAAGAGCCAAGGAAUCAGCUAAGGACAUUGUUAGUGUGAAGCAGAACAUAGACAAGAGAGCUUGGCCCUAUGUCAUCAAUGAUCUUCGCCUCAGGGCUGAGUAUCUUCGCUAUGAUCUCAACACUAUUAUCUCUGCUAAACCCAAAGAAGAGAAGAAGUCCCUCAAGGAACUCACUGGAAAGCUCUUUGCUGCCAUCAGUGGGCUGGAUCAUGCAGCCAAGAUUAAGAGUACCCCAGAGGCAGAGAAAUACUAUGCCCAGACUGUGUCUACUCUGAAUGAUGUUCUUGCUAAAAUUGGCUAAGAGAUUUCAAUUCAUGUAUUUUCUUGUAAACUUUGUUAAUUACUUUAUGCAACACUUCUUUUGGCUGCUAAAAGUAAUUAACAAAGUUUACAAGAAAAUACAUGAAUUGAAAUCUCUUAGCCAAUUUUAGCAAGAACAUCAUUCAGAGUAGACACAGUCUGGGCAUAGUAUUUCUCUGCCUCUGGGGUACUCUUAAUCUUGGCUGCAUGAUCCAGCCCACUGAUGGCAGCAAAGAGCUUUCCAGUGAGUUCCUUGAGGGACUUCUUCUCUUCUUUGGGUUUAGCAGAGAUAAUAGUGUUGAGAUCAUAGCGAAGAUACUCAGCCCUGAGGCGAAGAUCAUUGAUGACAUAGGGCCAAGCUCUCUUGUCUAUGUUCUGCUUCACACUAACAAUGUCCUUAGCUGAUUCCUUGGCUCUUGCUGCUGCCUCAUAUGGGGUUUUUGGUUGCAGGAAAAACCUGCUCUUAUAUGGCAAGUCCAAGUCUCUUGGCUCAUCAGAAUUUAGAGUCCCAGGCAGUCCACCGGAGGGAAGGGGAGGUGG