ncRNA ID | novel_tse_miR29 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 18 |
Mature sequence(if miRNA) | 943 - GGAGGGAAGGGGAGGUGG - 960 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AU   ACA  UC   ACCUCCCCUUCCCUCCGGUGGACUGCCUGGGACUCUAAAUUCUGAUGAGCCAAGAGACUUGGACUUGCCAUAUAAGAGCAGGUUUUUCCUGCAACCAAAAACCCCAUAUGAGGCAGCAGCAAGAGCCAAGGAAUCAGCUAAGGACAUUGUUAGUGUGAAGCAGAACAUAGACAAGAGAGCUUGGCCCUAUGUCAUCAAUGAUCUUCGCCUCAGGGCUGAGUAUCUUCGCUAUGAUCUCAACACUAUUAUCUCUGCUAAACCCAAAGAAGAGAAGAAGUCCCUCAAGGAACUCACUGGAAAGCUCUUUGCUGCCAUCAGUGGGCUGGAUCAUGCAGCCAAGAUUAAGAGUACCCCAGAGGCAGAGAAAUACUAUGCCCAGACUGUGUCUACUCUGAAUGAUGUUCUUGCUAAAAUUGGCUAAGAGAUUUCAAUUCAUGUAUUUUCUUGUAAACUUUGUUAAUUACUUU  GCA   CU  U   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||   ||   UGGAGGGGAAGGGAGGCCACCUGACGGACCCUGAGAUUUAAGACUACUCGGUUCUCUGAACCUGAACGGUAUAUUCUCGUCCAAAAAGGACGUUGGUUUUUGGGGUAUACUCCGUCGUCGUUCUCGGUUCCUUAGUCGAUUCCUGUAACAAUCACACUUCGUCUUGUAUCUGUUCUCUCGAACCGGGAUACAGUAGUUACUAGAAGCGGAGUCCCGACUCAUAGAAGCGAUACUAGAGUUGUGAUAAUAGAGACGAUUUGGGUUUCUUCUCUUCUUCAGGGAGUUCCUUGAGUGACCUUUCGAGAAACGACGGUAGUCACCCGACCUAGUACGUCGGUUCUAAUUCUCAUGGGGUCUCCGUCUCUUUAUGAUACGGGUCUGACACAGAUGAGACUUACUACAAGAACGAUUUUAACCGAUUCUCUAAAGUUAAGUACAUAAAAGAACAUUUGAAACAAUUAAUGAAA  CGU   GG  U GG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AU   --C  UU |
Stem-loop sequence | ACCUCCCCUUCCCUCCGGUGGACUGCCUGGGACUCUAAAUUCUGAUGAGCCAAGAGACUUGGACUUGCCAUAUAAGAGCAGGUUUUUCCUGCAACCAAAAACCCCAUAUGAGGCAGCAGCAAGAGCCAAGGAAUCAGCUAAGGACAUUGUUAGUGUGAAGCAGAACAUAGACAAGAGAGCUUGGCCCUAUGUCAUCAAUGAUCUUCGCCUCAGGGCUGAGUAUCUUCGCUAUGAUCUCAACACUAUUAUCUCUGCUAAACCCAAAGAAGAGAAGAAGUCCCUCAAGGAACUCACUGGAAAGCUCUUUGCUGCCAUCAGUGGGCUGGAUCAUGCAGCCAAGAUUAAGAGUACCCCAGAGGCAGAGAAAUACUAUGCCCAGACUGUGUCUACUCUGAAUGAUGUUCUUGCUAAAAUUGGCUAAGAGAUUUCAAUUCAUGUAUUUUCUUGUAAACUUUGUUAAUUACUUUAUGCAACACUUCUUUUGGCUGCUAAAAGUAAUUAACAAAGUUUACAAGAAAAUACAUGAAUUGAAAUCUCUUAGCCAAUUUUAGCAAGAACAUCAUUCAGAGUAGACACAGUCUGGGCAUAGUAUUUCUCUGCCUCUGGGGUACUCUUAAUCUUGGCUGCAUGAUCCAGCCCACUGAUGGCAGCAAAGAGCUUUCCAGUGAGUUCCUUGAGGGACUUCUUCUCUUCUUUGGGUUUAGCAGAGAUAAUAGUGUUGAGAUCAUAGCGAAGAUACUCAGCCCUGAGGCGAAGAUCAUUGAUGACAUAGGGCCAAGCUCUCUUGUCUAUGUUCUGCUUCACACUAACAAUGUCCUUAGCUGAUUCCUUGGCUCUUGCUGCUGCCUCAUAUGGGGUUUUUGGUUGCAGGAAAAACCUGCUCUUAUAUGGCAAGUCCAAGUCUCUUGGCUCAUCAGAAUUUAGAGUCCCAGGCAGUCCACCGGAGGGAAGGGGAGGUGG |