ncRNA ID | novel_tse_miR20 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 18 |
Mature sequence(if miRNA) | 912 - GGAGGGAAGGGAGGAGGG - 929 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                                                                     U    U  GA   CUCCUCCCUUCCCUCCCUUCUGCAUCUUCAAACAAGAGAAAAACCACCACUGAGGUUGAUGAUGAUGCUGAAGUUAUUUUUAGGACUUGGCUUCGCUCUAAGUUCGAUGAGUUCGUCAGGUUGCUUAUCGAUCUUCUUCUAUCUGUGCAAGCGGAGGAAGCUUUGAGAGAAUUUGUGCUCGAUUCCCUUAUGGAAGUCAUGAAACUCGGUAAUGGAGGAAGAUUUCAUUCGGCUAUAUAUCAUAGAUUACUUCAUAAUAUUGUUCUCUCAGCAACGCCUGUUGAUUUUGUAUUAGAUUUACUUGCUUCCAAGUAUUUCAAGUACAUUGAUAUCCGUUAUUUUACCUACAUUAGCCUUGAAAAACUGGCUAAAACUUUGGAGGAAAAAGAGAACCCUGAUGAUGAUAGUAAGAAUGCAAAUGGAAAUGAUGAGAGCUAUUCAAGGGCAAGCAUG AUCU GU  A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||   GAGGAGGGAAGGGAGGGAAGACGUAGAAGUUUGUUCUCUUUUUGGUGGUGACUCCAACUACUACUACGACUUCAAUAAAAAUCCUGAACCGAAGCGAGAUUCAAGCUACUCAAGCAGUCCAACGAAUAGCUAGAAGAAGAUAGACACGUUCGCCUCCUUCGAAACUCUCUUAAACACGAGCUAAGGGAAUACCUUCAGUACUUUGAGCCAUUACCUCCUUCUAAAGUAAGCCGAUAUAUAGUAUCUAAUGAAGUAUUAUAACAAGAGAGUCGUUGCGGACAACUAAAACAUAAUCUAAAUGAACGAAGGUUCAUAAAGUUCAUGUAACUAUAGGCAAUAAAAUGGAUGUAAUCGGAACUUUUUGACCGAUUUUGAAACCUCCUUUUUCUCUUGGGACUACUACUAUCAUUCUUACGUUUACCUUUACUACUCUCGAUAAGUUCCCGUUCGUAC UAGA CA  U GG                                                                                                                                                                                                                                                                                                                                                                                                                                                                     C    -  GA |
Stem-loop sequence | CUCCUCCCUUCCCUCCCUUCUGCAUCUUCAAACAAGAGAAAAACCACCACUGAGGUUGAUGAUGAUGCUGAAGUUAUUUUUAGGACUUGGCUUCGCUCUAAGUUCGAUGAGUUCGUCAGGUUGCUUAUCGAUCUUCUUCUAUCUGUGCAAGCGGAGGAAGCUUUGAGAGAAUUUGUGCUCGAUUCCCUUAUGGAAGUCAUGAAACUCGGUAAUGGAGGAAGAUUUCAUUCGGCUAUAUAUCAUAGAUUACUUCAUAAUAUUGUUCUCUCAGCAACGCCUGUUGAUUUUGUAUUAGAUUUACUUGCUUCCAAGUAUUUCAAGUACAUUGAUAUCCGUUAUUUUACCUACAUUAGCCUUGAAAAACUGGCUAAAACUUUGGAGGAAAAAGAGAACCCUGAUGAUGAUAGUAAGAAUGCAAAUGGAAAUGAUGAGAGCUAUUCAAGGGCAAGCAUGUAUCUUGUGAAUAGACAGAUCCAUGCUUGCCCUUGAAUAGCUCUCAUCAUUUCCAUUUGCAUUCUUACUAUCAUCAUCAGGGUUCUCUUUUUCCUCCAAAGUUUUAGCCAGUUUUUCAAGGCUAAUGUAGGUAAAAUAACGGAUAUCAAUGUACUUGAAAUACUUGGAAGCAAGUAAAUCUAAUACAAAAUCAACAGGCGUUGCUGAGAGAACAAUAUUAUGAAGUAAUCUAUGAUAUAUAGCCGAAUGAAAUCUUCCUCCAUUACCGAGUUUCAUGACUUCCAUAAGGGAAUCGAGCACAAAUUCUCUCAAAGCUUCCUCCGCUUGCACAGAUAGAAGAAGAUCGAUAAGCAACCUGACGAACUCAUCGAACUUAGAGCGAAGCCAAGUCCUAAAAAUAACUUCAGCAUCAUCAUCAACCUCAGUGGUGGUUUUUCUCUUGUUUGAAGAUGCAGAAGGGAGGGAAGGGAGGAGGG |