ncRNA ID | novel_tse_miR9 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 21 |
Mature sequence(if miRNA) | 294 - AGGAGAGAGAAAUGCAAUUUC - 314 |
Stem-loop(if miRNA) |
--        A                      -                          U                          AU   U    C                 G     C    C  C  AACAAAAG  -ACCAAC     A  G   AAUUGCAU UCUCUCUCCUCUGUUAGCUUUU AACCUUGACUUGCAUGUAUCUUGUUU AACUCGCUUGUCCGCCUCGGGAAUGA  CCU AGCA CUCUUUUUGAAUCUAAA UAGAU AUGA AC AG        GU       GCUAA UU A   |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||| ||||||||||||||||| ||||| |||| || ||        ||       ||||| || U   UUAACGUA AGAGAGAGGAGACAAUCGAAAA UUGGAACUGAACGUACAUAGAACAAA UUGAGCGAACAGGCGGAGUCCUUAUU  GGA UCGU GAGAAAAACUUAGAUUU AUCUA UACU UG UC        CA       CGAUU AA C CU        A                      A                          C                          CU   C    A                 A     C    C  A  CUCGCUUA  AACACUA     -  A |
Stem-loop sequence | AAUUGCAUAUCUCUCUCCUCUGUUAGCUUUUAACCUUGACUUGCAUGUAUCUUGUUUUAACUCGCUUGUCCGCCUCGGGAAUGAAUCCUUAGCACCUCUUUUUGAAUCUAAAGUAGAUCAUGACACCAGAACAAAAGGUACCAACGCUAAAUUGAUCAAAUUAGCAUCACAAACAUUCGCUCCUAGUCUCAUCAUCUAAUUUAGAUUCAAAAAGAGAUGCUCAGGUCUUAUUCCUGAGGCGGACAAGCGAGUUCAAACAAGAUACAUGCAAGUCAAGGUUAAAAAGCUAACAGAGGAGAGAGAAAUGCAAUUUC |