ncRNA ID | novel_tse_miR8 |
Species | Triadica sebifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAGCACAAACUUUGUGCAUUU - 21 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                                                                                                       C   A   CAUUAUU   CAGCACAAACUUUGUGCAUUUUCUCUGAAACUGCUCCGGGGAGAAGCUUUGCUUCUUUGUGCUUACACAGGGCCCUUUAUGGAGUAGAUCAAUUUCCAGAUUAAAGUGGAUUUGACAGCUGAUCUAGAUCAAAGUGACUGGAUGGCUGUUUAGCAUCCAUGUUUUUAUCACAUGUAGAGCGUUUUACGUUCUAGCUUCUGUUGGCCAUUAUAAUAUGGCACUGGAUAUUGUCACUAGUGCCUCAGUUGUCCCAGCUUCAGAAUUCAUUACCCAGAUUGUUGAGGGCAUGAUUGAGAUCACAUAUGCUGCUAACAACGUAAUCAUCAAGAAAGAGAGUUUUAAAGAACUUGCCAUCUACAUGGAAAGGAUUAUACCCAUUUUGAAUGAGUUGAAUAAGAAAGAUAUAU UCA UCG       U   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||   GUCGUGUUUGAAACACGUAAAAGAGACUUUGACGAGGCCCCUCUUCGAAACGAAGAAACACGAAUGUGUCCCGGGAAAUACCUCAUCUAGUUAAAGGUCUAAUUUCACCUAAACUGUCGACUAGAUCUAGUUUCACUGACCUACCGACAAAUCGUAGGUACAAAAAUAGUGUACAUCUCGCAAAAUGCAAGAUCGAAGACAACCGGUAAUAUUAUACCGUGACCUAUAACAGUGAUCACGGAGUCAACAGGGUCGAAGUCUUAAGUAAUGGGUCUAACAACUCCCGUACUAACUCUAGUGUAUACGACGAUUGUUGCAUUAGUAGUUCUUUCUCUCAAAAUUUCUUGAACGGUAGAUGUACCUUUCCUAAUAUGGGUAAAACUUACUCAACUUAUUCUUUCUAUAUA AGU AGC       A AG                                                                                                                                                                                                                                                                                                                                                                                                                       C   A   CUCUCGA |
Stem-loop sequence | CAGCACAAACUUUGUGCAUUUUCUCUGAAACUGCUCCGGGGAGAAGCUUUGCUUCUUUGUGCUUACACAGGGCCCUUUAUGGAGUAGAUCAAUUUCCAGAUUAAAGUGGAUUUGACAGCUGAUCUAGAUCAAAGUGACUGGAUGGCUGUUUAGCAUCCAUGUUUUUAUCACAUGUAGAGCGUUUUACGUUCUAGCUUCUGUUGGCCAUUAUAAUAUGGCACUGGAUAUUGUCACUAGUGCCUCAGUUGUCCCAGCUUCAGAAUUCAUUACCCAGAUUGUUGAGGGCAUGAUUGAGAUCACAUAUGCUGCUAACAACGUAAUCAUCAAGAAAGAGAGUUUUAAAGAACUUGCCAUCUACAUGGAAAGGAUUAUACCCAUUUUGAAUGAGUUGAAUAAGAAAGAUAUAUCUCAAUCGCAUUAUUUAAGCUCUCCGAAUGACAUAUAUCUUUCUUAUUCAACUCAUUCAAAAUGGGUAUAAUCCUUUCCAUGUAGAUGGCAAGUUCUUUAAAACUCUCUUUCUUGAUGAUUACGUUGUUAGCAGCAUAUGUGAUCUCAAUCAUGCCCUCAACAAUCUGGGUAAUGAAUUCUGAAGCUGGGACAACUGAGGCACUAGUGACAAUAUCCAGUGCCAUAUUAUAAUGGCCAACAGAAGCUAGAACGUAAAACGCUCUACAUGUGAUAAAAACAUGGAUGCUAAACAGCCAUCCAGUCACUUUGAUCUAGAUCAGCUGUCAAAUCCACUUUAAUCUGGAAAUUGAUCUACUCCAUAAAGGGCCCUGUGUAAGCACAAAGAAGCAAAGCUUCUCCCCGGAGCAGUUUCAGAGAAAAUGCACAAAGUUUGUGCUGGA |