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BaseInfo

ncRNA ID	osa-miRf11148-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AUGGUACCUCCUGAAGGACC - NA
Stem-loop(if miRNA)	A  A                --CACUUUU   UAU      -          CU  A   C GCAAUUUUACGGUCCUU AG AGGUACCAUGAGGUAC         UUC   UGUAAA UUUGGUACCU  UG UAU U ||||||||||||||||| || ||||||||||||||||         |||   |||||| ||||||||||  || ||| CGUUAAGAUGCCAGGAA UC UCCAUGGUAUUCCAUG         AAG   ACAUUU AAACCAUGGA  AU AUG A                  G  C                UUUUUUUUU   -UC      U          UU  C   U
Stem-loop sequence	GCAAUUUUACGGUCCUUAAGAAGGUACCAUGAGGUACCACUUUUUUCUAUUGUAAAUUUGGUACCUCUUGAUAUCUAUGUACUAUUAGGUACCAAAUUUUACACUGAAUUUUUUUUUGUACCUUAUGGUACCUCCUGAAGGACCGUAGAAUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK072846.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   |||||||*|||||||||||| targets:1697   GGUCCUUAAGGAGGUACCAU   1716 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023143D15, full insert sequence	NA	coding protein	psRNATarget
XM_015790029.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   |||||||*|||||||||||| targets:2078   GGUCCUUAAGGAGGUACCAU   2097 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342289 (LOC4342289), transcript variant X1, mRNA	uncharacterized LOC4342289(LOC4342289)	coding protein	psRNATarget
XM_015790030.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   |||||||*|||||||||||| targets:2122   GGUCCUUAAGGAGGUACCAU   2141 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342289 (LOC4342289), transcript variant X2, mRNA	uncharacterized LOC4342289(LOC4342289)	coding protein	psRNATarget
XM_015757723.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   ||||=||*|||||||||||| targets:435   GGUCUUUGAGGAGGUACCAU   454 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group TD and POZ domain-containing protein 4 (LOC9271695), mRNA	TD and POZ domain-containing protein 4(LOC9271695)	coding protein	psRNATarget
AK288182.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   *||||||*|||||||||||| targets:1300   UGUCCUUGAGGAGGUACCAU   1319 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090005J12, full insert sequence	NA	coding protein	psRNATarget
AK062883.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   *|||||*||||||||*|||| targets:506   AGUCCUACAGGAGGUUCCAU   525 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-108-D07, full insert sequence	NA	coding protein	psRNATarget
XM_015755605.1	ncRNA:20   CCAGGAAGUCCUCCAUGGUA   1   *|||||*||||||||*|||| targets:551   AGUCCUACAGGAGGUUCCAU   570 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346602 (LOC4346602), mRNA	uncharacterized LOC4346602(LOC4346602)	coding protein	psRNATarget