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BaseInfo

ncRNA ID osa-miRf11145-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - CAGCCCUUGCUUGCCGAACAGG - NA
Stem-loop(if miRNA)             -U  C         -A   AAACC  AG -- AACUGGAACA
GGCCUGUUCGGC  GC AGGGCUGCG  CGC     GU  C  C          G
||||||||||||  || |||||||||  |||     ||  |  |          U
CCGGACAAGCCG  CG UCCCGACGU  GCG     CA  G  G          C
            UU  U         CG   -ACGA  -- AA CACGAACGCC
Stem-loop sequence GGCCUGUUCGGCUGCCAGGGCUGCGACGCAAACCGUAGCCAACUGGAACAGUCCCGCAAGCACGAAGACAGCAGCGGCUGCAGCCCUUGCUUGCCGAACAGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015794610.1
ncRNA:22   GG-ACAAGCCGUUCGUUCCCGAC   1
  ||-||||||*||||||*||||||
targets:612   CCGUGUUCGACAAGCACGGGCUG   634

2.5 PREDICTED: Oryza sativa Japonica Group peroxidase 55 (LOC4346141), mRNA peroxidase 55(LOC4346141) coding protein psRNATarget
AK073978.1
ncRNA:22   GG-ACAAGCCGUUCGUUCCCGAC   1
  ||-||||||*||||||*||||||
targets:619   CCGUGUUCGACAAGCACGGGCUG   641

2.5 Oryza sativa Japonica Group cDNA clone:J033076N21, full insert sequence NA coding protein psRNATarget