ncRNA ID | novel_cnu_miR13 |
Species | Cocos nucifera |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 18 |
Mature sequence(if miRNA) | 624 - GGAGGGAAAAGGUUGGAG - 641 |
Stem-loop(if miRNA) |
--     A     G              C                  U                                                CA        C                    U                                                                                                                                                                                     U  UGAUG   G   CCAAC UUUUU CUCCGAUCACCCUG GCACAAUAACCAAGCUUC UGUCUAGACCCCAAGCAUGAAUCAAGUCAUUUUGAAUCAUAUGCCAUG  CAGCGCCA GCAGCUCUUGAAAAAACAGG GCCAUCAUUUCUACCCACCCUGUGCAUGGAGGAGCAGUACUAUUCUCGUAACAUCUCCCACCACCUCUGAACUUGUACAUUCUUCUGUGUACAUCUCCUUUUCUCGAACGUGCAGUGAUUCCAUAAUGAACCUCGGAUUUUGCAGUGUCCAAGGCAGGCUGUGAUAUCUCUAGUCCUUCCC CU     AUU A   ||||| ||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     |||   GGUUG AAAAG GAGGCUAGUGGGAC CGUGUUAUUGGUUCGAAG ACAGAUCUGGGGUUCGUACUUAGUUCAGUAAAACUUAGUAUACGGUGC  GUUGCGGU CGUUGAGAACUUUUUUGUCC CGGUAGUAAAGAUGGGUGGGACACGUACCUCCUCGUCAUGAUAAGAGCAUUGUAGAGGGUGGUGGAGACUUGAACAUGUAAGAAGACACAUGUAGAGGAAAAGAGCUUGCACGUCACUAAGGUAUUACUUGGAGCCUAAAACGUCACAGGUUCCGUCCGACACUAUAGAGAUCAGGAAGGG GA     UAA U GA     G     G              A                  U                                                AC        C                    U                                                                                                                                                                                     -  UUCAA   A |
Stem-loop sequence | CCAACAUUUUUGCUCCGAUCACCCUGCGCACAAUAACCAAGCUUCUUGUCUAGACCCCAAGCAUGAAUCAAGUCAUUUUGAAUCAUAUGCCAUGCACAGCGCCACGCAGCUCUUGAAAAAACAGGUGCCAUCAUUUCUACCCACCCUGUGCAUGGAGGAGCAGUACUAUUCUCGUAACAUCUCCCACCACCUCUGAACUUGUACAUUCUUCUGUGUACAUCUCCUUUUCUCGAACGUGCAGUGAUUCCAUAAUGAACCUCGGAUUUUGCAGUGUCCAAGGCAGGCUGUGAUAUCUCUAGUCCUUCCCUCUUGAUGAUUGAUAAAUAACUUAGGGGAAGGACUAGAGAUAUCACAGCCUGCCUUGGACACUGCAAAAUCCGAGGUUCAUUAUGGAAUCACUGCACGUUCGAGAAAAGGAGAUGUACACAGAAGAAUGUACAAGUUCAGAGGUGGUGGGAGAUGUUACGAGAAUAGUACUGCUCCUCCAUGCACAGGGUGGGUAGAAAUGAUGGCUCCUGUUUUUUCAAGAGUUGCCUGGCGUUGCACGUGGCAUAUGAUUCAAAAUGACUUGAUUCAUGCUUGGGGUCUAGACAUGAAGCUUGGUUAUUGUGCACAGGGUGAUCGGAGGGAAAAGGUUGGAG |