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BaseInfo

ncRNA ID	osa-miRf11141-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GAUGACCCUCAUCUGUGACGGG - NA
Stem-loop(if miRNA)	UAAUAA          AAAAA   U                A  A    --UAU   A       AAGCCCGUCA     GAG GUCAUCUGUGACGGGC UU AACU     CUC A       ||||||||||     ||| |||||||||||||||| || ||||     |||       UUCGGGCAGU     CUC CAGUAGACACUGCCCG AG UUGA     GGG U AUUUUC          GUCUA   C                -  G    UCUCC   C
Stem-loop sequence	UAAUAAAAGCCCGUCAAAAAAGAGUGUCAUCUGUGACGGGCAUUAAACUUAUCUCAAUCGGGCCUCUAGUUGGAGCCCGUCACAGAUGACCCUCAUCUGUGACGGGCUUCUUUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288447.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   |||||||||||||||*|||||| targets:565   CCCGUCACAGAUGAGUGUCAUC   586 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence	NA	coding protein	psRNATarget
AK107543.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   ||||||||=|||||*||||||| targets:1706   CCCGUCACGGAUGAUGGUCAUC   1727 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
AK107543.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   =*||||||=|||||*||||||| targets:1615   UACGUCACGGAUGAUGGUCAUC   1636 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence	NA	coding protein	psRNATarget
HI404308.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   ||||||||*||||||*|||||| targets:100   CCCGUCACCGAUGAGAGUCAUC   121 Target Full Sequence	2.5	Sequence 2433 from Patent EP2074227	NA	coding protein	psRNATarget
JB164769.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   ||||||||*||||||*|||||| targets:100   CCCGUCACCGAUGAGAGUCAUC   121 Target Full Sequence	2.5	Sequence 2433 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236438.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   ||||||||*||||||*|||||| targets:100   CCCGUCACCGAUGAGAGUCAUC   121 Target Full Sequence	2.5	Sequence 2433 from Patent EP2985353	NA	coding protein	psRNATarget
CT833642.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   *=||||=*|||||||||||||* targets:193   GUCGUCGGAGAUGAGGGUCAUG   214 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA227D02, full insert sequence	NA	coding protein	psRNATarget
CT828076.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   *=||||=*|||||||||||||* targets:224   GUCGUCGGAGAUGAGGGUCAUG   245 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA220N19, full insert sequence	NA	coding protein	psRNATarget
XM_015783777.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   *|||**=||||||||||||||| targets:646   GCCGGAGCAGAUGAGGGUCAUC   667 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group disease resistance protein RPP13 (LOC4339113), mRNA	disease resistance protein RPP13(LOC4339113)	coding protein	psRNATarget
AK067981.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   **=||||*|||||||||||||* targets:190   GGUGUCAGAGAUGAGGGUCAUG   211 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013126J03, full insert sequence	NA	coding protein	psRNATarget
XM_015779505.1	ncRNA:22   GGGCAGUGUCUACUCCCAGUAG   1   **=||||*|||||||||||||* targets:318   GGUGUCAGAGAUGAGGGUCAUG   339 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein At1g67900 (LOC4336159), transcript variant X1, mRNA	BTB/POZ domain-containing protein At1g67900(LOC4336159)	coding protein	psRNATarget