ncRNA ID | novel_bca_miR13 |
Species | Brassica carinata |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 18 |
Mature sequence(if miRNA) | 124 - GGAGGGAAAAGCUGUGGA - 141 |
Stem-loop(if miRNA) |
CAACAA       ----     --  -AUU     CAU     UCCCAUAC    UUCUACUCUCUUCAAC    -A   AA       CACAGCU    CCUCC  UG    UCUUG   UUGCC        AGAC                GGCA  UCC  C       |||||||    |||||  ||    |||||   |||||        ||||                ||||  |||  A       GUGUCGA    GGAGG  AC    AGGAC   AACGG        UCUG                UCGU  AGG  A ----AG       AAAG     UA  AAUU     -CU     ---UAACU    ----------CCACCC    CA   CC |
Stem-loop sequence | CAACAACACAGCUCCUCCUGAUUUCUUGCAUUUGCCUCCCAUACAGACUUCUACUCUCUUCAACGGCAAUCCAACAACCGGAACUGCUCCCACCGUCUUCAAUGGCAAUCCAGGAUUAACAAUGGAGGGAAAAGCUGUGGA |