ncRNA ID | novel_bca_miR3 |
Species | Brassica carinata |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | Predicted |
Length | 20 |
Mature sequence(if miRNA) | 631 - AACAGAAGAAACAGAAGAUU - 650 |
Stem-loop(if miRNA) |
--                                                                                                                                                                                                                                                                                                                                  C   UCUUCUGUUUCUUCUGUUUCUUCUGUUUCUACUGAAUCUUCAGCUUCUGAAUCUGGCGGUGUCUCACCAGAACAUUUAACCACUUGUUCUAUCCAUGCCUGAUAGUAGCGUACAACAUGCUUAUGUUGCAAGCCCGAGAGUGCUUGCACCUCUCGAAGCAUAGCGUUGUUGAGCUCCUUCGUCUUCUUCUUUGGCUUGAUCAAUUUCAGAGCAUACUCUCGACCAUCAUUAUAGUUUUUGCAAAGAUAAACGGUAGCGAAACCACCUUUGCCAAGUUUUUCCAGCUGCUGGAAGUUCUGGAGAUAGCGUGUCCUUUUGGAAG U   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   AGAAGACAAAGAAGACAAAGAAGACAAAGAUGACUUAGAAGUCGAAGACUUAGACCGCCACAGAGUGGUCUUGUAAAUUGGUGAACAAGAUAGGUACGGACUAUCAUCGCAUGUUGUACGAAUACAACGUUCGGGCUCUCACGAACGUGGAGAGCUUCGUAUCGCAACAACUCGAGGAAGCAGAAGAAGAAACCGAACUAGUUAAAGUCUCGUAUGAGAGCUGGUAGUAAUAUCAAAAACGUUUCUAUUUGCCAUCGCUUUGGUGGAAACGGUUCAAAAAGGUCGACGACCUUCAAGACCUCUAUCGCACAGGAAAACCUUC A UU                                                                                                                                                                                                                                                                                                                                  G |
Stem-loop sequence | UCUUCUGUUUCUUCUGUUUCUUCUGUUUCUACUGAAUCUUCAGCUUCUGAAUCUGGCGGUGUCUCACCAGAACAUUUAACCACUUGUUCUAUCCAUGCCUGAUAGUAGCGUACAACAUGCUUAUGUUGCAAGCCCGAGAGUGCUUGCACCUCUCGAAGCAUAGCGUUGUUGAGCUCCUUCGUCUUCUUCUUUGGCUUGAUCAAUUUCAGAGCAUACUCUCGACCAUCAUUAUAGUUUUUGCAAAGAUAAACGGUAGCGAAACCACCUUUGCCAAGUUUUUCCAGCUGCUGGAAGUUCUGGAGAUAGCGUGUCCUUUUGGAAGCUAGCUUCCAAAAGGACACGCUAUCUCCAGAACUUCCAGCAGCUGGAAAAACUUGGCAAAGGUGGUUUCGCUACCGUUUAUCUUUGCAAAAACUAUAAUGAUGGUCGAGAGUAUGCUCUGAAAUUGAUCAAGCCAAAGAAGAAGACGAAGGAGCUCAACAACGCUAUGCUUCGAGAGGUGCAAGCACUCUCGGGCUUGCAACAUAAGCAUGUUGUACGCUACUAUCAGGCAUGGAUAGAACAAGUGGUUAAAUGUUCUGGUGAGACACCGCCAGAUUCAGAAGCUGAAGAUUCAGUAGAAACAGAAGAAACAGAAGAAACAGAAGAUU |