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BaseInfo

ncRNA ID novel_bca_miR3
Species Brassica carinata
Class miRNA
Genome position NA
Reference genome NA
Source Predicted
Length 20
Mature sequence(if miRNA) 631 - AACAGAAGAAACAGAAGAUU - 650
Stem-loop(if miRNA) --                                                                                                                                                                                                                                                                                                                                  C
  UCUUCUGUUUCUUCUGUUUCUUCUGUUUCUACUGAAUCUUCAGCUUCUGAAUCUGGCGGUGUCUCACCAGAACAUUUAACCACUUGUUCUAUCCAUGCCUGAUAGUAGCGUACAACAUGCUUAUGUUGCAAGCCCGAGAGUGCUUGCACCUCUCGAAGCAUAGCGUUGUUGAGCUCCUUCGUCUUCUUCUUUGGCUUGAUCAAUUUCAGAGCAUACUCUCGACCAUCAUUAUAGUUUUUGCAAAGAUAAACGGUAGCGAAACCACCUUUGCCAAGUUUUUCCAGCUGCUGGAAGUUCUGGAGAUAGCGUGUCCUUUUGGAAG U
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  AGAAGACAAAGAAGACAAAGAAGACAAAGAUGACUUAGAAGUCGAAGACUUAGACCGCCACAGAGUGGUCUUGUAAAUUGGUGAACAAGAUAGGUACGGACUAUCAUCGCAUGUUGUACGAAUACAACGUUCGGGCUCUCACGAACGUGGAGAGCUUCGUAUCGCAACAACUCGAGGAAGCAGAAGAAGAAACCGAACUAGUUAAAGUCUCGUAUGAGAGCUGGUAGUAAUAUCAAAAACGUUUCUAUUUGCCAUCGCUUUGGUGGAAACGGUUCAAAAAGGUCGACGACCUUCAAGACCUCUAUCGCACAGGAAAACCUUC A
UU                                                                                                                                                                                                                                                                                                                                  G
Stem-loop sequence UCUUCUGUUUCUUCUGUUUCUUCUGUUUCUACUGAAUCUUCAGCUUCUGAAUCUGGCGGUGUCUCACCAGAACAUUUAACCACUUGUUCUAUCCAUGCCUGAUAGUAGCGUACAACAUGCUUAUGUUGCAAGCCCGAGAGUGCUUGCACCUCUCGAAGCAUAGCGUUGUUGAGCUCCUUCGUCUUCUUCUUUGGCUUGAUCAAUUUCAGAGCAUACUCUCGACCAUCAUUAUAGUUUUUGCAAAGAUAAACGGUAGCGAAACCACCUUUGCCAAGUUUUUCCAGCUGCUGGAAGUUCUGGAGAUAGCGUGUCCUUUUGGAAGCUAGCUUCCAAAAGGACACGCUAUCUCCAGAACUUCCAGCAGCUGGAAAAACUUGGCAAAGGUGGUUUCGCUACCGUUUAUCUUUGCAAAAACUAUAAUGAUGGUCGAGAGUAUGCUCUGAAAUUGAUCAAGCCAAAGAAGAAGACGAAGGAGCUCAACAACGCUAUGCUUCGAGAGGUGCAAGCACUCUCGGGCUUGCAACAUAAGCAUGUUGUACGCUACUAUCAGGCAUGGAUAGAACAAGUGGUUAAAUGUUCUGGUGAGACACCGCCAGAUUCAGAAGCUGAAGAUUCAGUAGAAACAGAAGAAACAGAAGAAACAGAAGAUU