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BaseInfo

ncRNA ID	novel_zma_miR15390
Species	Zea mays
Class	miRNA
Genome position	Chr1:100397107-100397167 [-]
Reference genome	RefGen_v4
Source	SRR2089708
Length	24
Mature sequence(if miRNA)	38 - UCUGGUCAGGCGCGGACGGUCCGA - 61
Stem-loop(if miRNA)	--    -      -       G    GA       UCUG GUCAGG CGCGGAC GUCC  GGCCU   |||| |||||| ||||||| ||||  ||||G   GGAC CGGUCC GCGCCUG CAGG  CCGGG GG    G      A       G    --
Stem-loop sequence	UCUGGUCAGGCGCGGACGGUCCGAGGCCUGGGGCCGGACGGUCCGCGACCUGGCGCAGGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ096610.1	ncRNA:24   AGCCUGGCAGGCGCGGACUGGUCU   1   *|||||||||||||=||||||||| targets:22   GCGGACCGUCCGCGUCUGACCAGA   45 Target Full Sequence	1.5	TSA: Zea mays contig32265, mRNA sequence	NA	coding protein	psRNATarget
BT064394.1	ncRNA:24   AGCCUGGCAGGCGCGGACUGGUCU   1   |||--|||||||*||||||||||= targets:212   UCG--CCGUCCGAGCCUGACCAGG   233 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0165F05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008683355.1	ncRNA:24   AGCCUGGCAGGCGCGGACUGGUCU   1   |||--|||||||*||||||||||= targets:473   UCG--CCGUCCGAGCCUGACCAGG   494 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274851 (LOC100274851), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001149115.1	ncRNA:24   AGCCUGGCAGGCGCGGACUGGUCU   1   |||--|||||||*||||||||||= targets:473   UCG--CCGUCCGAGCCUGACCAGG   494 Target Full Sequence	2.5	Zea mays uncharacterized LOC100274851 (LOC100274851), mRNA	NA	coding protein	psRNATarget
EU953176.1	ncRNA:24   AGCCUGGCAGGCGCGGACUGGUCU   1   |||--|||||||*||||||||||= targets:473   UCG--CCGUCCGAGCCUGACCAGG   494 Target Full Sequence	2.5	Zea mays clone 1389174 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget