ncRNA ID | novel_zma_miR15379 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:276549621-276549742 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 99 - GAUGGGCGCAUCGGACAGUUCGGU - 122 |
Stem-loop(if miRNA) |
--GA   -   -        A         G    CCAC  CACCCAACCGUUAGGGUUCUG     UGG GCG CAUCGGAC GUUCGGUGC CCAG    GU                     A     ||| ||| |||||||| ||||||||| ||||    ||                     C     GCC CGC GUGGUCUG CAGGCCACG GGUU    CA                     G ACAG   A   U        A         G    -CUA  GUCUCGAGGUUGCCAGUUUUG |
Stem-loop sequence | GAUGGGCGCAUCGGACAGUUCGGUGCGCCAGCCACGUCACCCAACCGUUAGGGUUCUGACGGUUUUGACCGUUGGAGCUCUGACAUCUUGGGGCACCGGACAGUCUGGUGUCGCACCGGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ057358.1 |
|
1.5 | TSA: Zea mays contig58480, mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EU952213.1 |
|
2.5 | Zea mays clone 1226497 hypothetical protein mRNA, complete cds | NA | coding protein | psRNATarget |