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BaseInfo

ncRNA ID	novel_zma_miR15375
Species	Zea mays
Class	miRNA
Genome position	Chr1:24119558-24119660 [+]
Reference genome	RefGen_v4
Source	SRR2089708
Length	24
Mature sequence(if miRNA)	1 - GGUGGAUUUUGACUAGUUGUGGAU - 24
Stem-loop(if miRNA)	--                                                    GGUGGAUUUUGACUAGUUGUGGAUUUAUUCCCCCUCAAUCCACAUAUCCA   |||||||||||||||||||||||||||||||||||||||||||||||||G   CCACCUAAAACUGAUCAACACCUAAAUAAGGGGGAGUUAGGUGUAUAGGU CU
Stem-loop sequence	GGUGGAUUUUGACUAGUUGUGGAUUUAUUCCCCCUCAAUCCACAUAUCCAGUGGAUAUGUGGAUUGAGGGGGAAUAAAUCCACAACUAGUCAAAAUCCACCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ240934.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:38   AUCCAUAACAAGUCAAAAUCCACC   61 Target Full Sequence	2.0	Sequence 6929 from Patent EP2985353	NA	coding protein	psRNATarget
JB169265.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:38   AUCCAUAACAAGUCAAAAUCCACC   61 Target Full Sequence	2.0	Sequence 6929 from Patent EP2559767	NA	coding protein	psRNATarget
HI408804.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:38   AUCCAUAACAAGUCAAAAUCCACC   61 Target Full Sequence	2.0	Sequence 6929 from Patent EP2074227	NA	coding protein	psRNATarget
EU941886.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:118   AUCCAUAACAAGUCAAAAUCCACC   141 Target Full Sequence	2.0	Zea mays clone 1471521 mRNA sequence	NA	coding protein	psRNATarget
NM_001138477.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:1216   AUCCAUAACAAGUCAAAAUCCACC   1239 Target Full Sequence	2.0	Zea mays Transmembrane 9 superfamily member 9 (LOC100193342), mRNA	NA	coding protein	psRNATarget
BT035580.1	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:1216   AUCCAUAACAAGUCAAAAUCCACC   1239 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0070I12 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008668946.2	ncRNA:24   UAGGUGUUGAUCAGUUUUAGGUGG   1   |||||=|||*|||||||||||||| targets:2328   AUCCAUAACAAGUCAAAAUCCACC   2351 Target Full Sequence	2.0	PREDICTED: Zea mays Transmembrane 9 superfamily member 9 (LOC100193342), transcript variant X1, mRNA	NA	coding protein	psRNATarget