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BaseInfo

ncRNA ID novel_zma_miR15347
Species Zea mays
Class miRNA
Genome position Chr1:1608973-1609052 [+]
Reference genome RefGen_v4
Source SRR2089708
Length 22
Mature sequence(if miRNA) 1 - GGAGGUCGUAGGAAGUUAGCGG - 22
Stem-loop(if miRNA) GGA     ----            ----    C   U    ACG
   GGUCG    UAGGAAGUUAGC    GGCU GUU GACC   U
   |||||    ||||||||||||    |||| ||| ||||   U
   CCGGU    AUCCUUCAAUCG    UCGA CAA CUGG   C
-UG     GUAG            AAAA    -   -    CUA
Stem-loop sequence GGAGGUCGUAGGAAGUUAGCGGCUCGUUUGACCACGUUCAUCGGUCAACAGCUAAAAGCUAACUUCCUAGAUGUGGCCGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086229.2
ncRNA:22   GGCGAUUGAAGGAUGCUGGAGG   1
  |=||*|||||||||||||||||
targets:1169   CUGCAAACUUCCUACGACCUCC   1190

1.0 Zea mays full-length cDNA clone ZM_BFc0134M03 mRNA, complete cds NA coding protein psRNATarget