ncRNA ID | novel_zma_miR15346 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:164285334-164285419 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 63 - GGUUCCAGUGACUAAAUCGGACUA - 86 |
Stem-loop(if miRNA) |
--    -           -A        -------           A   GUUC AUUUAGUCACU  GACUAAAU       UUUAGUGACUA A   |||| |||||||||||  ||||||||       ||||||||||| G   CAGG UAAAUCAGUGA  UUGGUUUG       AAAUCGCUGAU U AU    C           CC        UUCCAUG           U |
Stem-loop sequence | GUUCAUUUAGUCACUAGACUAAAUUUUAGUGACUAAAGUUUAGUCGCUAAAGUACCUUGUUUGGUUCCAGUGACUAAAUCGGACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU946806.1 |
|
1.0 | Zea mays clone 323778 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_008658979.2 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103636623 (LOC103636623), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008665258.2 |
|
1.0 | PREDICTED: Zea mays Sugar isomerase (SIS) family protein (LOC103641959), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008653737.2 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC103631898 (LOC103631898), mRNA | NA | coding protein | psRNATarget |