ncRNA ID | novel_zma_miR15336 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:101491976-101492076 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 78 - UGGCGAAAGAUUGGGUUGGGGCAA - 101 |
Stem-loop(if miRNA) |
--       --A     GG       -  AG    --    U  C    G AGG   UGGCGAA   GAUUG  UUGGGGC AA  GUCG  GUGC GC GGUG C   C   |||||||   |||||  ||||||| ||  ||||  |||| || |||| |   U   ACUGUUU   CUGGU  GGCUUCG UU  CAGC  CACG CG UCAC G   A CG       GUG     --       G  GA    GG    -  C    G GGU |
Stem-loop sequence | UGGCGAAAGAUUGGGUUGGGGCAAAGGUCGGUGCUGCCGGUGGCAGGCUAUGGGGCACUCGCGCACGGCGACAGUUGGCUUCGGUGGUCGUGUUUGUCAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001111734.1 |
|
1.5 | Zea mays legumin-like protein (LOC542101), mRNA | NA | coding protein | psRNATarget | |||||||||
AY183450.1 |
|
1.5 | Zea mays legumin-like protein mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU962998.1 |
|
1.5 | Zea mays clone 247172 legumin-like protein mRNA, complete cds | NA | coding protein | psRNATarget |