ncRNA ID | novel_zma_miR15331 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:116232883-116232989 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 84 - UGAGUUCUCUGUCGAUGGGCACAC - 107 |
Stem-loop(if miRNA) |
--     G GA -         UG ---AUUA  U     GUGG         G  U   GUGUU A  G UAGAGAGCU  G       CU GAAUG    UGGUUGGGG UA U   ||||| |  | |||||||||  |       || |||||    ||||||||| ||   CACGG U  C GUCUCUUGA  C       GA CUUAC    ACCAACCCC AU U CA     G AG U         GU GAUCGCC  U     ---A         G  A |
Stem-loop sequence | GUGUUGAGAGUAGAGAGCUUGGAUUACUUGAAUGGUGGUGGUUGGGGGUAUUUAUAGCCCCAACCAACAUUCUAGCCGCUAGCUGAGUUCUCUGUCGAUGGGCACAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT064593.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0188B15 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
BT063396.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0059P01 mRNA, complete cds | NA | coding protein | psRNATarget |