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BaseInfo

ncRNA ID novel_zma_miR15323
Species Zea mays
Class miRNA
Genome position Chr6:22250386-22250433 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 25 - AACGGCUGGCACUCGGCAAAGAUG - 48
Stem-loop(if miRNA) AA    -                U
  CGGC UGGCACUCGGCAAAGA G
  |||| ||||||||||||||||
  GUUG ACCGUGAGCCGUUUCU C
-C    C                U
Stem-loop sequence AACGGCUGGCACUCGGCAAAGAUGCUUCUUUGCCGAGUGCCACGUUGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166323.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  **|||||||=|||||||||=||||
targets:8   ACUCUUUGCUGAGUGCCAGUCGUU   31

2.5 Sequence 3987 from Patent EP2559767 NA coding protein psRNATarget
HI405862.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  **|||||||=|||||||||=||||
targets:8   ACUCUUUGCUGAGUGCCAGUCGUU   31

2.5 Sequence 3987 from Patent EP2074227 NA coding protein psRNATarget
LQ237992.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  **|||||||=|||||||||=||||
targets:8   ACUCUUUGCUGAGUGCCAGUCGUU   31

2.5 Sequence 3987 from Patent EP2985353 NA coding protein psRNATarget
LQ241826.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  |*||||||||||||||||||*|||
targets:42   CCUCUUUGCCGAGUGCCAGCAGUU   65

1.5 Sequence 7821 from Patent EP2985353 NA coding protein psRNATarget
JB170157.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  |*||||||||||||||||||*|||
targets:42   CCUCUUUGCCGAGUGCCAGCAGUU   65

1.5 Sequence 7821 from Patent EP2559767 NA coding protein psRNATarget
HI409696.1
ncRNA:24   GUAGAAACGGCUCACGGUCGGCAA   1
  |*||||||||||||||||||*|||
targets:42   CCUCUUUGCCGAGUGCCAGCAGUU   65

1.5 Sequence 7821 from Patent EP2074227 NA coding protein psRNATarget