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BaseInfo

ncRNA ID	osa-miRf11129-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GGUACCGUGAGGUACCGAUA - NA
Stem-loop(if miRNA)	U   C                GUAU        GUAA    C CUUGA GUA CGGUACCUCACGGUAC    CAAAUUGU    GAUC A ||||| ||| ||||||||||||||||    ||||||||    |||| GAGCU CAU GCCAUGGAGUGCCAUG    GUUUAGCA    CUAG A      C   A                ----        AAAA    C
Stem-loop sequence	CUUGAUGUACCGGUACCUCACGGUACGUAUCAAAUUGUGUAAGAUCCAACGAUCAAAAACGAUUUGGUACCGUGAGGUACCGAUACCUCGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK242475.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   |||=|||||||||=|||||| targets:1298   UAUUGGUACCUCAUGGUACC   1317 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J080303E02, full insert sequence	NA	coding protein	psRNATarget
XM_015760380.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||||||||||||||||| targets:1034   UACCGGUACCUCACGGUACC   1053 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group tropinone reductase homolog At5g06060 (LOC4326949), mRNA	tropinone reductase homolog At5g06060(LOC4326949)	coding protein	psRNATarget
CT835540.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   *||=|||||||||=|||||| targets:485   GAUUGGUACCUCAUGGUACC   504 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA016M01, full insert sequence	NA	coding protein	psRNATarget
AK106122.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   *||=|||||||||=|||||| targets:917   AAUUGGUACCUCAUGGUACC   936 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-207-E12, full insert sequence	NA	coding protein	psRNATarget
JB164621.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:1   UACUGGUACCUCACGGUACC   20 Target Full Sequence	2.0	Sequence 2285 from Patent EP2559767	NA	coding protein	psRNATarget
HI404160.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:1   UACUGGUACCUCACGGUACC   20 Target Full Sequence	2.0	Sequence 2285 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236290.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:1   UACUGGUACCUCACGGUACC   20 Target Full Sequence	2.0	Sequence 2285 from Patent EP2985353	NA	coding protein	psRNATarget
LQ236289.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:14   UACUGGUACCUCACGGUACC   33 Target Full Sequence	2.0	Sequence 2284 from Patent EP2985353	NA	coding protein	psRNATarget
JB164620.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:14   UACUGGUACCUCACGGUACC   33 Target Full Sequence	2.0	Sequence 2284 from Patent EP2559767	NA	coding protein	psRNATarget
HI404159.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*=|||||||||||||||| targets:14   UACUGGUACCUCACGGUACC   33 Target Full Sequence	2.0	Sequence 2284 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015758597.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   |||=|*|||||||||||||| targets:863   UAUUGAUACCUCACGGUACC   882 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable glutathione S-transferase GSTU6 (LOC4349191), mRNA	probable glutathione S-transferase GSTU6(LOC4349191)	coding protein	psRNATarget
AK059726.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   |||=|*|||||||||||||| targets:866   UAUUGAUACCUCACGGUACC   885 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:006-201-C07, full insert sequence	NA	coding protein	psRNATarget
AF402801.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   |||=|*|||||||||||||| targets:882   UAUUGAUACCUCACGGUACC   901 Target Full Sequence	2.0	Oryza sativa (japonica cultivar-group) clone S14053 putative glutathione S-transferase OsGSTU14 mRNA, complete cds	NA	coding protein	psRNATarget
LQ235663.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*|||||||*||||||||| targets:33   UACCGGUACCCCACGGUACC   52 Target Full Sequence	2.5	Sequence 1658 from Patent EP2985353	NA	coding protein	psRNATarget
HI403533.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*|||||||*||||||||| targets:33   UACCGGUACCCCACGGUACC   52 Target Full Sequence	2.5	Sequence 1658 from Patent EP2074227	NA	coding protein	psRNATarget
JB163994.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*|||||||*||||||||| targets:33   UACCGGUACCCCACGGUACC   52 Target Full Sequence	2.5	Sequence 1658 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||*|||||||||||||| targets:643   UACCGAUACCUCACGGUACC   662 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
AK100297.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||*|||||||||||||| targets:1315   UACCGAUACCUCACGGUACC   1334 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J023077B14, full insert sequence	NA	coding protein	psRNATarget
XM_015793616.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||*|||||||||||||| targets:1490   UACCGAUACCUCACGGUACC   1509 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group probable auxin efflux carrier component 4 (LOC4346116), mRNA	probable auxin efflux carrier component 4(LOC4346116)	coding protein	psRNATarget
AK287529.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||*|||||||||||||| targets:154   UACCGAUACCUCACGGUACC   173 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*||*|||||||||||||| targets:154   UACCGAUACCUCACGGUACC   173 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
CT833476.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   |||=**|||||||||||||| targets:956   UAUUAAUACCUCACGGUACC   975 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN072I05, full insert sequence	NA	coding protein	psRNATarget
BT131386.1	ncRNA:20   AUAGCCAUGGAGUGCCAUGG   1   ||*|*||||||||||||||* targets:440   UACCUGUACCUCACGGUACA   459 Target Full Sequence	3.0	Oryza sativa clone RRlibD00936 mRNA sequence	NA	coding protein	psRNATarget