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BaseInfo

ncRNA ID novel_zma_miR15309
Species Zea mays
Class miRNA
Genome position Chr5:28166722-28166817 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 73 - AAAAUACCUUAUGUCCGACGGCUG - 96
Stem-loop(if miRNA) --AAA                                          A
     AUACCUUAUGUCCGACGGCUGUCAGCGAAGCCGUCGGAUGUA G
     ||||||||||||||||||||||||||||||||||||||||||
     UGUGGAAUACAGGCUGCCGACAGUCGCUUCGGCAGUCUGUAU C
UUUUA                                          U
Stem-loop sequence AAAAUACCUUAUGUCCGACGGCUGUCAGCGAAGCCGUCGGAUGUAAGCUUAUGUCUGACGGCUUCGCUGACAGCCGUCGGACAUAAGGUGUAUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ090405.1
ncRNA:24   GUCGGCAGCCUGUAUUCCAUAAAA   1
  **|*=||||**|||||||||||||
targets:31   AUGAUGUCGAUCAUAAGGUAUUUU   54

2.0 TSA: Zea mays contig26052, mRNA sequence NA coding protein psRNATarget