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BaseInfo

ncRNA ID	novel_zma_miR15308
Species	Zea mays
Class	miRNA
Genome position	Chr5:35261515-35261620 [-]
Reference genome	RefGen_v4
Source	SRR2089708
Length	21
Mature sequence(if miRNA)	86 - UUUAAAAUUAUAAUCUGUCAG - 106
Stem-loop(if miRNA)	--UUUAA         C    -   G     A    C  C      U               AAUUAUAAU UGUC AGA UUAUA AAUC AA AUAUUU AAAUUGAA        ||||||||| |||| ||| ||||| |||| || |||||| |||||||U        UUAAUAUUA ACAG UCU AAUAU UUAG UU UAUAAA UUUGAUUG ACAAACC         U    G   -     A    A  A      -
Stem-loop sequence	UUUAAAAUUAUAAUCUGUCAGAGUUAUAAAAUCCAACAUAUUUUAAAUUGAAUGUUAGUUUAAAUAUAUUAGAUUAUAUAAUCUGGACAUAUUAUAAUUCCAAACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY111263.1	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   ||||||||||||||||||||| targets:285   CUGACAGAUUAUAAUUUUAAA   305 Target Full Sequence	0.0	Zea mays CL8731_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008665368.2	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   =||=|||||||||||||*||| targets:1571   UUGGCAGAUUAUAAUUUCAAA   1591 Target Full Sequence	2.5	PREDICTED: Zea mays Putative heavy metal transport/detoxification superfamily protein (LOC103642052), mRNA	NA	coding protein	psRNATarget
AY105541.1	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   =**|=|||||||||||||||| targets:2104   UAAAUAGAUUAUAAUUUUAAA   2124 Target Full Sequence	2.0	Zea mays PCO077463 mRNA sequence	NA	coding protein	psRNATarget
EZ061911.1	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   =**|=|||||||||||||||| targets:450   UAAAUAGAUUAUAAUUUUAAA   470 Target Full Sequence	2.0	TSA: Zea mays contig63033, mRNA sequence	NA	coding protein	psRNATarget
EU947686.1	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   =*|||||*|||||=||||||| targets:705   UGGACAGUUUAUAGUUUUAAA   725 Target Full Sequence	2.5	Zea mays clone 352454 mRNA sequence	NA	coding protein	psRNATarget
AY110982.1	ncRNA:21   GACUGUCUAAUAUUAAAAUUU   1   =||*|||*||||||||||||* targets:4   UUGCCAGUUUAUAAUUUUAAU   24 Target Full Sequence	3.0	Zea mays CL39764_1 mRNA sequence	NA	coding protein	psRNATarget