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BaseInfo

ncRNA ID novel_zma_miR15302
Species Zea mays
Class miRNA
Genome position Chr5:149979534-149979587 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AAAGGGCUUAUUUUCGGCGGCGUC - 24
Stem-loop(if miRNA) --U             -    A  U C
   GCUGCCGAAAAUA GCCU UU U G
   ||||||||||||| |||| || | G
   CGGCGGCUUUUAU CGGG AA G C
CUG             U    A  C G
Stem-loop sequence UGCUGCCGAAAAUAGCCUAUUUUCGGCGGCAAAGGGCUUAUUUUCGGCGGCGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ239334.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2985353 NA coding protein psRNATarget
HI407204.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2074227 NA coding protein psRNATarget
JB167665.1
ncRNA:24   CUGCGGCGGCUUUUAUUCGGGAAA   1
  *|*|||||||||||||||*|||||
targets:6   AAAGCCGCCGAAAAUAAGGCCUUU   29

1.5 Sequence 5329 from Patent EP2559767 NA coding protein psRNATarget