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BaseInfo

ncRNA ID novel_zma_miR15293
Species Zea mays
Class miRNA
Genome position Chr4:108051730-108051803 [+]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 51 - GCAGGGAACGGAGCGAGCUGACAU - 74
Stem-loop(if miRNA) --       -  UAG   --A       ----AG      A
  GUCAGCU GU   CCG   UUUGCGU      CGCUCA U
  ||||||| ||   |||   |||||||      |||||| C
  CAGUCGA CG   GGC   GGACGCA      GUGGGU A
UA       G  --A   AAG       GUCAGA      U
Stem-loop sequence GUCAGCUGUUAGCCGAUUUGCGUAGCGCUCAAUCAUUGGGUGAGACUGACGCAGGGAACGGAGCGAGCUGACAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020538415.1
ncRNA:24   UACAGUCGAGCGAGGCAAGGGACG   1
  ||||||||||||||||||||||||
targets:61   AUGUCAGCUCGCUCCGUUCCCUGC   84

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020538416.1
ncRNA:24   UACAGUCGAGCGAGGCAAGGGACG   1
  ||||||||||||||||||||||||
targets:62   AUGUCAGCUCGCUCCGUUCCCUGC   85

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020538414.1
ncRNA:24   UACAGUCGAGCGAGGCAAGGGACG   1
  ||||||||||||||||||||||||
targets:58   AUGUCAGCUCGCUCCGUUCCCUGC   81

0.0 PREDICTED: Zea mays uncharacterized LOC109939932 (LOC109939932), transcript variant X1, mRNA NA coding protein psRNATarget