Search result

BaseInfo

ncRNA ID osa-miRf11126-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CAUACAGGCCACUUAAGAAG - NA
Stem-loop(if miRNA)      G  G           C     GG    -A  GGCCUCUUAAGAGAGCUCAUGUUGCAU
AUACG CU CUUAAGUGGCC GUAUG  AAAA  CG                           G
||||| || ||||||||||| |||||  ||||  ||                           C
UAUGC GA GAAUUCACCGG CAUAC  UUUU  CU                           G
     A  A           A     UU    AA  AAAAAGAUACGCCCGCGAAUCCACUCG
Stem-loop sequence AUACGGCUGCUUAAGUGGCCCGUAUGGGAAAAACGGGCCUCUUAAGAGAGCUCAUGUUGCAUGCGGCUCACCUAAGCGCCCGCAUAGAAAAAUCAAUUUUUUCAUACAGGCCACUUAAGAAGACGUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK243210.1
ncRNA:20   GAAGAAUUCACCGGACAUAC   1
  =|||||*||||||||||*||
targets:1340   UUUCUUCAGUGGCCUGUUUG   1359

2.5 Oryza sativa Japonica Group cDNA, clone: J100042D22, full insert sequence NA coding protein psRNATarget
AK067555.1
ncRNA:20   GAAGAAUUCACCGGACAUAC   1
  =|||||*||||||||||*||
targets:2450   UUUCUUCAGUGGCCUGUUUG   2469

2.5 Oryza sativa Japonica Group cDNA clone:J013111F17, full insert sequence NA coding protein psRNATarget