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BaseInfo

ncRNA ID	novel_zma_miR15289
Species	Zea mays
Class	miRNA
Genome position	Chr10:76421272-76421326 [+]
Reference genome	RefGen_v4
Source	SRR2089708
Length	19
Mature sequence(if miRNA)	1 - CGCACCGGACAGUCAACAG - 19
Stem-loop(if miRNA)	-C       ACAGUCAACAGGACCUGU   GCACCGG                  C   |||||||   GGUGGCC                  U CC       UGUCAGGCUACUACGUGG
Stem-loop sequence	CGCACCGGACAGUCAACAGGACCUGUCUGGUGCAUCAUCGGACUGUCCGGUGGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT083610.2	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*|||||||||||||| targets:588   CUGUAGACUGUCCGGUGCG   606 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0019A02 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001349964.1	ncRNA:19   GACAACUGACAGGCCACGC   1   |||||*||||||||||||| targets:2980   CUGUUCACUGUCCGGUGCG   2998 Target Full Sequence	1.0	Zea mays uncharacterized LOC100278112 (IDP592), mRNA	NA	coding protein	psRNATarget
BT069074.2	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*|||||||=|||||| targets:552   CUGUAGACUGUCUGGUGCG   570 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
HI409990.1	ncRNA:19   GACAACUGACAGGCCACGC   1   |||||*|||||||||||*| targets:4   CUGUUCACUGUCCGGUGAG   22 Target Full Sequence	2.5	Sequence 8115 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242120.1	ncRNA:19   GACAACUGACAGGCCACGC   1   |||||*|||||||||||*| targets:4   CUGUUCACUGUCCGGUGAG   22 Target Full Sequence	2.5	Sequence 8115 from Patent EP2985353	NA	coding protein	psRNATarget
JB170451.1	ncRNA:19   GACAACUGACAGGCCACGC   1   |||||*|||||||||||*| targets:4   CUGUUCACUGUCCGGUGAG   22 Target Full Sequence	2.5	Sequence 8115 from Patent EP2559767	NA	coding protein	psRNATarget
EZ106189.1	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*||||||||*||||| targets:42   CUGUAGACUGUCCAGUGCG   60 Target Full Sequence	2.5	TSA: Zea mays contig41847, mRNA sequence	NA	coding protein	psRNATarget
LQ242135.1	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*|*|||||||||||| targets:44   CUGUAGCCUGUCCGGUGCG   62 Target Full Sequence	2.5	Sequence 8130 from Patent EP2985353	NA	coding protein	psRNATarget
JB170466.1	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*|*|||||||||||| targets:44   CUGUAGCCUGUCCGGUGCG   62 Target Full Sequence	2.5	Sequence 8130 from Patent EP2559767	NA	coding protein	psRNATarget
HI410005.1	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||*|*|||||||||||| targets:44   CUGUAGCCUGUCCGGUGCG   62 Target Full Sequence	2.5	Sequence 8130 from Patent EP2074227	NA	coding protein	psRNATarget
BT065201.2	ncRNA:19   GACAACUGACAGGCCACGC   1   ||||**||||||||||||| targets:853   CUGUGCACUGUCCGGUGCG   871 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0032D05 mRNA, complete cds	NA	coding protein	psRNATarget