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BaseInfo

ncRNA ID	novel_zma_miR15281
Species	Zea mays
Class	miRNA
Genome position	Chr4:199414294-199414348 [-]
Reference genome	RefGen_v4
Source	SRR2089708
Length	24
Mature sequence(if miRNA)	32 - CGGACUGUCUGGUGUAGCACCGAA - 55
Stem-loop(if miRNA)	--     U          G     AAU   CGGAC GUCUGGUGUA CACCG   A   ||||| |||||||||| |||||   G   GCCUG CAGGCUACGU GUGGC   U UG     U          G     CUG
Stem-loop sequence	CGGACUGUCUGGUGUAGCACCGAAUAGUGUCCGGUGGUGCAUCGGACUGUCCGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT069074.2	ncRNA:24   AAGCCACGAUGUGGUCUGUCAGGC   1   |*|||||||*||||=||||||||| targets:678   UCCGGUGCUUCACCGGACAGUCCG   701 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   AAGCCACGAUGUGGUCUGUCAGGC   1   |*||||||**|||||||||||||| targets:723   UCCGGUGCACCACCAGACAGUCCG   746 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   AAGCCACGAUGUGGUCUGUCAGGC   1   ||*||||**=|||||||||||||| targets:481   UUGGGUGGCGCACCAGACAGUCCG   504 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
HI410005.1	ncRNA:23   AGC-CACGAUGUGGUCUGUCAGGC   1   |||-|||**=|||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCG   24 Target Full Sequence	3.0	Sequence 8130 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242135.1	ncRNA:23   AGC-CACGAUGUGGUCUGUCAGGC   1   |||-|||**=|||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCG   24 Target Full Sequence	3.0	Sequence 8130 from Patent EP2985353	NA	coding protein	psRNATarget
JB170466.1	ncRNA:23   AGC-CACGAUGUGGUCUGUCAGGC   1   |||-|||**=|||||||||||||| targets:1   UCGAGUGGCGCACCAGACAGUCCG   24 Target Full Sequence	3.0	Sequence 8130 from Patent EP2559767	NA	coding protein	psRNATarget