Search result

BaseInfo

ncRNA ID novel_zma_miR15277
Species Zea mays
Class miRNA
Genome position Chr4:245063881-245063958 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 1 - GGCCCCUAGCGCGGACCGUCCGGA - 24
Stem-loop(if miRNA) --     C      -    UU   G     C     G   
  CGGAC GUCCGC CUAG  GGC CGGAC GUCCG GCCU
  ||||| |||||| ||||  ||| ||||| ||||| |||C
  GCCUG CAGGCG GAUC  CCG GCCUG CAGGC CGGU
AG     C      C    -C   -     U     G   
Stem-loop sequence CGGACCGUCCGCCUAGUUGGCGCGGACCGUCCGGGCCUCUGGCGCGGACUGUCCGGCCCCUAGCGCGGACCGUCCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020540955.1
ncRNA:24   AGGCCUGCCAGGCGCGAUCCCCGG   1
  |||||||||||||||||*|||||=
targets:997   UCCGGACGGUCCGCGCUUGGGGCU   1020

2.5 PREDICTED: Zea mays probable LRR receptor-like serine/threonine-protein kinase At1g07650 (LOC103632613), transcript variant X5, mRNA NA coding protein psRNATarget