Search result

BaseInfo

ncRNA ID	novel_zma_miR15272
Species	Zea mays
Class	miRNA
Genome position	Chr10:47619607-47619674 [+]
Reference genome	RefGen_v4
Source	SRR2089708
Length	23
Mature sequence(if miRNA)	1 - UCUGGACACGUGGCGGCCCUGGA - 23
Stem-loop(if miRNA)	--     -A  C UG    -C    G    U    C   UCUGG  CA G  GCGG  CCUG ACCC CACC A   |||||  || |  ||||  |||| |||| |||| U   AGACC  GU C  UGUC  GGAC UGGG GUGG G UG     CG  - GU    AC    -    -    U
Stem-loop sequence	UCUGGACACGUGGCGGCCCUGGACCCUCACCCAUGUGGUGGGGUCAGGCACUGUUGCUGGCCCAGAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020545234.1	ncRNA:23   AGGUCCCGGCGGUGCACAGGUCU   1   |||||||||||||||||*||||= targets:4095   UCCAGGGCCGCCACGUGGCCAGG   4117 Target Full Sequence	2.5	PREDICTED: Zea mays ABC transporter I family member 1-like (LOC103642079), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020546823.1	ncRNA:23   AGGUCCCGGCGGUGCACAGGUCU   1   |||||||*|||||||||*||||| targets:2824   UCCAGGGGCGCCACGUGGCCAGA   2846 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643671 (LOC103643671), mRNA	NA	coding protein	psRNATarget
HI409929.1	ncRNA:23   AGGUCCCGGCGGUGCACAGGUCU   1   |||=|*|||*||||||||||||| targets:10   UCCGGUGCCACCACGUGUCCAGA   32 Target Full Sequence	2.0	Sequence 8054 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242059.1	ncRNA:23   AGGUCCCGGCGGUGCACAGGUCU   1   |||=|*|||*||||||||||||| targets:10   UCCGGUGCCACCACGUGUCCAGA   32 Target Full Sequence	2.0	Sequence 8054 from Patent EP2985353	NA	coding protein	psRNATarget
JB170390.1	ncRNA:23   AGGUCCCGGCGGUGCACAGGUCU   1   |||=|*|||*||||||||||||| targets:10   UCCGGUGCCACCACGUGUCCAGA   32 Target Full Sequence	2.0	Sequence 8054 from Patent EP2559767	NA	coding protein	psRNATarget