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BaseInfo

ncRNA ID	novel_zma_miR15271
Species	Zea mays
Class	miRNA
Genome position	Chr10:45412277-45412343 [+]
Reference genome	RefGen_v4
Source	SRR2089708
Length	24
Mature sequence(if miRNA)	44 - CGGUUUAAGGCUUAUUUCCGUCGG - 67
Stem-loop(if miRNA)	--   AU                    U    U   GAC  GAAUAAGCCUUAAACCGACG GAAU A   |||  |||||||||||||||||||| |||| C   CUG  UUUAUUCGGAAUUUGGCUGC CUUA U GG   CC                    C    U
Stem-loop sequence	GACAUGAAUAAGCCUUAAACCGACGUGAAUUACUUAUUCCCGUCGGUUUAAGGCUUAUUUCCGUCGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ240820.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||||||=||||||||*||||||| targets:16   CCGACGGGAAUAAGCCCUAAACCG   39 Target Full Sequence	2.5	Sequence 6815 from Patent EP2985353	NA	coding protein	psRNATarget
JB169151.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||||||=||||||||*||||||| targets:16   CCGACGGGAAUAAGCCCUAAACCG   39 Target Full Sequence	2.5	Sequence 6815 from Patent EP2559767	NA	coding protein	psRNATarget
HI408690.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||||||=||||||||*||||||| targets:16   CCGACGGGAAUAAGCCCUAAACCG   39 Target Full Sequence	2.5	Sequence 6815 from Patent EP2074227	NA	coding protein	psRNATarget
JB163388.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||*||||*||||||||*|||||| targets:13   CCGUCGGACAUAAGCCUCAAACCG   36 Target Full Sequence	2.5	Sequence 1052 from Patent EP2559767	NA	coding protein	psRNATarget
HI402927.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||*||||*||||||||*|||||| targets:13   CCGUCGGACAUAAGCCUCAAACCG   36 Target Full Sequence	2.5	Sequence 1052 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235057.1	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||*||||*||||||||*|||||| targets:13   CCGUCGGACAUAAGCCUCAAACCG   36 Target Full Sequence	2.5	Sequence 1052 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008652299.2	ncRNA:24   GGCUGCCUUUAUUCGGAAUUUGGC   1   |||*||*||||||||||||*|||| targets:1078   CCGUCGAAAAUAAGCCUUACACCG   1101 Target Full Sequence	2.5	PREDICTED: Zea mays putative bZIP transcription factor superfamily protein (LOC103631376), mRNA	NA	coding protein	psRNATarget