ncRNA ID | novel_zma_miR15264 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:63172675-63172796 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GACUUCGUUGUAGGCCUUCGUCGU - 24 |
Stem-loop(if miRNA) |
--GA       G            GUAGG     --     G GGUGAGGAGGACGGAGGGUGG     CUUCGUU UAGGCCUUCGUC     CCUUC  GUCUU U                     C     ||||||| ||||||||||||     |||||  ||||| |     GAAGCGA GUUCGGAAGCGG     GAGUG  GUGGU A                     U AUGG       G            ---UG     AC     - GCCUCCGUUCUACUACCGUAC |
Stem-loop sequence | GACUUCGUUGUAGGCCUUCGUCGUAGGCCUUCGUCUUGUGGUGAGGAGGACGGAGGGUGGCUCAUGCCAUCAUCUUGCCUCCGAUGGUGCAGUGAGGUGGCGAAGGCUUGGAGCGAAGGGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001174484.1 |
|
1.5 | Zea mays uncharacterized LOC100381671 (LOC100381671), mRNA | NA | coding protein | psRNATarget | |||||||||
BT061941.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFb0199M15 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EU943059.1 |
|
1.5 | Zea mays clone 1557478 mRNA sequence | NA | coding protein | psRNATarget |