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BaseInfo

ncRNA ID novel_zma_miR15264
Species Zea mays
Class miRNA
Genome position Chr3:63172675-63172796 [+]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 1 - GACUUCGUUGUAGGCCUUCGUCGU - 24
Stem-loop(if miRNA) --GA       G            GUAGG     --     G GGUGAGGAGGACGGAGGGUGG
    CUUCGUU UAGGCCUUCGUC     CCUUC  GUCUU U                     C
    ||||||| ||||||||||||     |||||  ||||| |
    GAAGCGA GUUCGGAAGCGG     GAGUG  GUGGU A                     U
AUGG       G            ---UG     AC     - GCCUCCGUUCUACUACCGUAC
Stem-loop sequence GACUUCGUUGUAGGCCUUCGUCGUAGGCCUUCGUCUUGUGGUGAGGAGGACGGAGGGUGGCUCAUGCCAUCAUCUUGCCUCCGAUGGUGCAGUGAGGUGGCGAAGGCUUGGAGCGAAGGGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001174484.1
ncRNA:24   UGCUGCUUCCGGAUGUUGCUUCAG   1
  |*|||||||||||||=||||||||
targets:842   AAGACGAAGGCCUACGACGAAGUC   865

1.5 Zea mays uncharacterized LOC100381671 (LOC100381671), mRNA NA coding protein psRNATarget
BT061941.1
ncRNA:24   UGCUGCUUCCGGAUGUUGCUUCAG   1
  |*|||||||||||||=||||||||
targets:842   AAGACGAAGGCCUACGACGAAGUC   865

1.5 Zea mays full-length cDNA clone ZM_BFb0199M15 mRNA, complete cds NA coding protein psRNATarget
EU943059.1
ncRNA:24   UGCUGCUUCCGGAUGUUGCUUCAG   1
  |*|||||||||||||=||||||||
targets:832   AAGACGAAGGCCUACGACGAAGUC   855

1.5 Zea mays clone 1557478 mRNA sequence NA coding protein psRNATarget