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BaseInfo

ncRNA ID	novel_zma_miR15262
Species	Zea mays
Class	miRNA
Genome position	Chr3:8852314-8852396 [-]
Reference genome	RefGen_v4
Source	SRR2089708
Length	24
Mature sequence(if miRNA)	60 - GGGUGGAUUGAGGGGGAUUGGAGG - 83
Stem-loop(if miRNA)	--   U                  ---GG             U   GGG GGAUUGAGGGGGAUUGGA     GGUCCCUCCCUAU C   ||| ||||||||||||||||||     ||||||||||||| A   UCC CCUAACUCCCUCUAAUUU     UUAGGGAGGGAUA A CC   -                  AGGGG             A
Stem-loop sequence	GGGUGGAUUGAGGGGGAUUGGAGGGGUCCCUCCCUAUUCAAAAUAGGGAGGGAUUGGGGAUUUAAUCUCCCUCAAUCCCCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   |||||||||||||||||||||||| targets:3276   CCUCCAAUCCCCCUCAAUCCACCC   3299 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
BT067503.1	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   |||||||||||||||||||||||= targets:1597   CCUCCAAUCCCCCUCAAUCCACCU   1620 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0066C23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176181.1	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   |||||||||||||||||||||||= targets:1597   CCUCCAAUCCCCCUCAAUCCACCU   1620 Target Full Sequence	1.0	Zea mays uncharacterized LOC100383533 (LOC100383533), mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   *||||||||||=|||||||||||| targets:3044   ACUCCAAUCCCUCUCAAUCCACCC   3067 Target Full Sequence	1.5	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   *||||||||||=|||||||||||| targets:3049   ACUCCAAUCCCUCUCAAUCCACCC   3072 Target Full Sequence	1.5	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020552750.1	ncRNA:24   GG-AGGUUAGGGGGAGUUAGGUGGG   1   ||-||=||||||=|||||||||||= targets:141   CCAUCUAAUCCCUCUCAAUCCACCU   165 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103654238 (LOC103654238), mRNA	NA	coding protein	psRNATarget
BT017648.1	ncRNA:24   GGAGGUUAGGGGGAGUUAGGUGGG   1   *|||-|||===||||||||||||| targets:216   ACUC-AAUUUUCCUCAAUCCACCC   238 Target Full Sequence	3.0	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget