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BaseInfo

ncRNA ID novel_zma_miR15258
Species Zea mays
Class miRNA
Genome position Chr10:12555001-12555089 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 23
Mature sequence(if miRNA) 67 - UAAACUAAGAACGUGGGUACUCA - 89
Stem-loop(if miRNA) --UAAAC                C        CAACAAACCCAU
       UAAGAACGUGGGUACU AUGUUCUU            G
       |||||||||||||||| ||||||||            A
       AUUCUUGCACCCAUGG UGCAAGAA            A
CAAUUAA                C        UUAACUCAAUUC
Stem-loop sequence UAAACUAAGAACGUGGGUACUCAUGUUCUUCAACAAACCCAUGAACUUAACUCAAUUAAGAACGUCGGUACCCACGUUCUUAAAUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163678.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2559767 NA coding protein psRNATarget
LQ235347.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2985353 NA coding protein psRNATarget
HI403217.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2074227 NA coding protein psRNATarget