ncRNA ID | novel_zma_miR15255 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:19774971-19775071 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 78 - GUACCCCGGGUGUGCGGUCGGACA - 101 |
Stem-loop(if miRNA) |
--    C   G    G   U    CA      A   ACAA     CC   G U   GUAC CCG GUGU CGG CGGA  CUAAAC CCG    UGUCA  AGC U A   |||| ||| |||| ||| ||||  |||||| |||    |||||  ||| | C   CGUG GGU UACA GUU GCCU  GGUUUG GGC    GCGGU  UCG A G CU    U   G    G   U    -A      -   ----     AC   G U |
Stem-loop sequence | GUACCCCGGGUGUGCGGUCGGACACUAAACACCGACAAUGUCACCAGCGUUACGUAGGCUCAUGGCGCGGGUUUGGAUCCGUUUGGACAUGUGGUGUGCUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008680077.2 |
|
2.5 | PREDICTED: Zea mays formin-like protein 3 (LOC103653113), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020542440.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109941458 (LOC109941458), mRNA | NA | coding protein | psRNATarget | |||||||||
EU949251.1 |
|
3.0 | Zea mays clone 400160 mRNA sequence | NA | coding protein | psRNATarget |