ncRNA ID | novel_zma_miR15251 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:178184982-178185151 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCUUAUAUCUUGGGACGGAGGGAG - 24 |
Stem-loop(if miRNA) |
--                               CUCUGC   AAAGA   AGA      --UUUAA  G      UACCAC     -  A   CCCUCCGUCCCAGGAUAUAAGGCGUAACCAC      UUC     CCA   AAUGUA       UU UCUCUA      UGCAU CG U   |||||||||||||||||||||||||||||||      |||     |||   ||||||       || ||||||      ||||| || G   GGGAGGCAGGGUUCUAUAUUCCGCAUUGGUG      AAG     GGU   UUAUAU       GA AGAGAU      ACGUA GC U GA                               AAAAAU   AACAG   --G      UCCGCAC  G      ------     U  A |
Stem-loop sequence | CCCUCCGUCCCAGGAUAUAAGGCGUAACCACCUCUGCUUCAAAGACCAAGAAAUGUAUUUAAUUGUCUCUAUACCACUGCAUCGAUGUACGUAUGCAUAGAGAGAGCACGCCUUAUAUUGUGGGACAAGAAUAAAAAGUGGUUACGCCUUAUAUCUUGGGACGGAGGGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008668484.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103645430 (LOC103645430), mRNA | NA | coding protein | psRNATarget |