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BaseInfo

ncRNA ID novel_zma_miR15251
Species Zea mays
Class miRNA
Genome position Chr3:178184982-178185151 [-]
Reference genome RefGen_v4
Source SRR2089708
Length 24
Mature sequence(if miRNA) 1 - CCUUAUAUCUUGGGACGGAGGGAG - 24
Stem-loop(if miRNA) --                               CUCUGC   AAAGA   AGA      --UUUAA  G      UACCAC     -  A
  CCCUCCGUCCCAGGAUAUAAGGCGUAACCAC      UUC     CCA   AAUGUA       UU UCUCUA      UGCAU CG U
  |||||||||||||||||||||||||||||||      |||     |||   ||||||       || ||||||      ||||| || G
  GGGAGGCAGGGUUCUAUAUUCCGCAUUGGUG      AAG     GGU   UUAUAU       GA AGAGAU      ACGUA GC U
GA                               AAAAAU   AACAG   --G      UCCGCAC  G      ------     U  A
Stem-loop sequence CCCUCCGUCCCAGGAUAUAAGGCGUAACCACCUCUGCUUCAAAGACCAAGAAAUGUAUUUAAUUGUCUCUAUACCACUGCAUCGAUGUACGUAUGCAUAGAGAGAGCACGCCUUAUAUUGUGGGACAAGAAUAAAAAGUGGUUACGCCUUAUAUCUUGGGACGGAGGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008668484.2
ncRNA:24   GAGGGAGGCAGGGUUCUAUAUUCC   1
  ||||=|||||||||=||||||||*
targets:427   CUCCUUCCGUCCCAGGAUAUAAGA   450

2.5 PREDICTED: Zea mays uncharacterized LOC103645430 (LOC103645430), mRNA NA coding protein psRNATarget