ncRNA ID | osa-miRf11122-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - UAGGUCUGGAGUAGAGUUGUGGAGC - NA |
Stem-loop(if miRNA) |
    A                C             GG  --------C      UA    U GUUU GGCAGCUCCACAACUC ACUCCAGACUUAG  CC         GUUUGG  GAGC G |||| |||||||||||||||| |||||||||||||  ||         ||||||  |||| CAAA CCGUCGAGGUGUUGAG UGAGGUCUGGAUU  GG         UAAAUC  CUCG C     C                A             GA  ACCUCAAUU      --    A |
Stem-loop sequence | GUUUAGGCAGCUCCACAACUCCACUCCAGACUUAGGGCCCGUUUGGUAGAGCUGCAGCUCCUAAAUUUAACUCCAGGAGUUAGGUCUGGAGUAGAGUUGUGGAGCUGCCCAAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015764612.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group aspartic proteinase nepenthesin-1 (LOC4352651), transcript variant X2, mRNA | aspartic proteinase nepenthesin-1(LOC4352651) | coding protein | psRNATarget | |||||||||
XM_015764611.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group aspartic proteinase nepenthesin-1 (LOC4352651), transcript variant X1, mRNA | aspartic proteinase nepenthesin-1(LOC4352651) | coding protein | psRNATarget |