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BaseInfo

ncRNA ID osa-miRf11122-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UAGGUCUGGAGUAGAGUUGUGGAGC - NA
Stem-loop(if miRNA)     A                C             GG  --------C      UA    U
GUUU GGCAGCUCCACAACUC ACUCCAGACUUAG  CC         GUUUGG  GAGC G
|||| |||||||||||||||| |||||||||||||  ||         ||||||  ||||
CAAA CCGUCGAGGUGUUGAG UGAGGUCUGGAUU  GG         UAAAUC  CUCG C
    C                A             GA  ACCUCAAUU      --    A
Stem-loop sequence GUUUAGGCAGCUCCACAACUCCACUCCAGACUUAGGGCCCGUUUGGUAGAGCUGCAGCUCCUAAAUUUAACUCCAGGAGUUAGGUCUGGAGUAGAGUUGUGGAGCUGCCCAAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015764612.1
ncRNA:25   CGAGGUGUUGAGAUGAGGUCUGGAU   1
  |||||*|||||=|||||||||||||
targets:2196   GCUCCUCAACUUUACUCCAGACCUA   2220

1.0 PREDICTED: Oryza sativa Japonica Group aspartic proteinase nepenthesin-1 (LOC4352651), transcript variant X2, mRNA aspartic proteinase nepenthesin-1(LOC4352651) coding protein psRNATarget
XM_015764611.1
ncRNA:25   CGAGGUGUUGAGAUGAGGUCUGGAU   1
  |||||*|||||=|||||||||||||
targets:2196   GCUCCUCAACUUUACUCCAGACCUA   2220

1.0 PREDICTED: Oryza sativa Japonica Group aspartic proteinase nepenthesin-1 (LOC4352651), transcript variant X1, mRNA aspartic proteinase nepenthesin-1(LOC4352651) coding protein psRNATarget