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BaseInfo

ncRNA ID novel_zma_miR15242
Species Zea mays
Class miRNA
Genome position Chr2:136160044-136160133 [+]
Reference genome RefGen_v4
Source SRR2089708
Length 23
Mature sequence(if miRNA) 1 - UAAACUAAGAACGUGGGUACUCA - 23
Stem-loop(if miRNA) --UA    -                 C      CAACAAACCCAU
    AACU AAGAACGUGGGUACUCA GUUCUU            G
    |||| ||||||||||||||||| ||||||            A
    UUGA UUCUUGCACCCAUGGGU CAAGAA            A
CCAA    A                 A      UUAACUCAAUUC
Stem-loop sequence UAAACUAAGAACGUGGGUACUCACGUUCUUCAACAAACCCAUGAACUUAACUCAAUUAAGAACAUGGGUACCCACGUUCUUAAGUUAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163678.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2559767 NA coding protein psRNATarget
HI403217.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2074227 NA coding protein psRNATarget
LQ235347.1
ncRNA:23   ACUCAUGGGUGCAAGAAUCAAAU   1
  ||=*||||||=||||||||||||
targets:60   UGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2985353 NA coding protein psRNATarget