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BaseInfo

ncRNA ID	ath-miRf10160-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - ACUCGACCAGGGGGUCGAGUAUG - NA
Stem-loop(if miRNA)	G          AGCG           GUCA       GCCUGAGCUGAGGUUACUCGAC GU AUAUUCGACC    GGUCGAGUGGC    UCGAGUG                      C || ||||||||||    |||||||||||    |||||||                      U UA UAUGAGCUGG    CCAGCUCACUG    CCUCGGU                      G   G          GGGA           -AAA       AAGAAGGGUAGAUGACCUGGGG
Stem-loop sequence	GUGAUAUUCGACCAGCGGGUCGAGUGGCGUCAUCGAGUGGCCUGAGCUGAGGUUACUCGACCUGGGGGUCCAGUAGAUGGGAAGAAUGGCUCCAAAGUCACUCGACCAGGGGGUCGAGUAUGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT014714.1	ncRNA:23   GUA--UGAGCUGGGGGACCAGCUCA   1   |||--|||||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***|||||||||||||||||||| targets:229   GCCACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUA--UGAGCUGGGGGACCAGCUCA   1   |||--|||||||||||||||||||| targets:178   CAUCUACUCGACCCCCUGGUCGAGU   202 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***|||||||||||||||||||| targets:229   GCCACUCGACCCCCUGGUCGAGU   251 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   |*||||||||||||||||||||| targets:307   CUUACUCGACCCCCUGGUCGAGU   329 Target Full Sequence	0.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GUA-UGAGCUGGGGGACCAGCUCA   1   *||-|||||||||||||||||||| targets:1569   GAUCACUCGACCCCCUGGUCGAGU   1592 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUA--------UGAGCUGGGGGACCAGCUCA   1   |||--------|||||||||||||||||||| targets:115   CAUGUCAAACCACUCGACCCCCUGGUCGAGU   145 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUA--------UGAGCUGGGGGACCAGCUCA   1   |||--------|||||||||||||||||||| targets:490   CAUGUCAAACCACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUA--------UGAGCUGGGGGACCAGCUCA   1   |||--------|||||||||||||||||||| targets:490   CAUGUCAAACCACUCGACCCCCUGGUCGAGU   520 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***|||||||||||||||||||| targets:89   ACCACUCGACCCCCUGGUCGAGU   111 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUA---UGAGCUGGGGGACCAGCUCA   1   |||---||||*||||||||||||||| targets:297   CAUGUUACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUA---UGAGCUGGGGGACCAGCUCA   1   |||---||||*||||||||||||||| targets:297   CAUGUUACUCAACCCCCUGGUCGAGU   322 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUA-UGAGCUGGGGGACCAGCUCA   1   |||-||*||||||||||||||||| targets:581   CAUUACYCGACCCCCUGGUCGAGU   604 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ||||||||||||||*|||||||| targets:135   CAUACUCGACCCCCAGGUCGAGU   157 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ||||||||||||||*|||||||| targets:135   CAUACUCGACCCCCAGGUCGAGU   157 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUA--UGAGCUGGGGGACCAGCUCA   1   |||--|||||||||||*|||||||| targets:184   CAUCUACUCGACCCCCAGGUCGAGU   208 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUA----UGAGCUGGGGGACCAGCUCA   1   |=|----||||||||||*||||||||| targets:530   CGUCACCACUCGACCCCAUGGUCGAGU   556 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***||||||||||*||||||||| targets:488   ACCACUCGACCCCGUGGUCGAGU   510 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***|||||||||||*|||||||| targets:1103   ACCACUCGACCCCCAGGUCGAGU   1125 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ***||||||||||*||||||||| targets:1208   ACCACUCGACCCCGUGGUCGAGU   1230 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUAUGAGCUGGGGGACCAGCUCA   1   ||||||=||||||||||||*||| targets:141   CAUACUUGACCCCCUGGUCUAGU   163 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget