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BaseInfo

ncRNA ID	novel_zma_miR15222
Species	Zea mays
Class	miRNA
Genome position	Chr2:230921634-230921688 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	21
Mature sequence(if miRNA)	1 - UUGGAUGGUAUUGAGUCGGUU - 21
Stem-loop(if miRNA)	--     UG        UC  -   CAA   UUGGA  GUAUUGAG  GG UUU   U   |||||  ||||||||  || |||   AACCU  UAUAACUC  CC AAA   C AU     UA        UA  U   UAC
Stem-loop sequence	UUGGAUGGUAUUGAGUCGGUUUCAAUCCAUAAAUCCAUCUCAAUAUAUUCCAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020551219.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||||||||||||||||||||| targets:285   AACCGACUCAAUACCAUCCAA   305 Target Full Sequence	0.0	PREDICTED: Zea mays WW domain-binding protein 11 (LOC100280956), mRNA	NA	coding protein	psRNATarget
BT041309.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   |||||||||||||=||||||| targets:101   AACCGACUCAAUAUCAUCCAA   121 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0380J08 mRNA, complete cds	NA	coding protein	psRNATarget
BT054344.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   |||||||||||||||||=||| targets:1125   AACCGACUCAAUACCAUUCAA   1145 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0357J03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152495.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   |||||||||||||||||=||| targets:1125   AACCGACUCAAUACCAUUCAA   1145 Target Full Sequence	1.5	Zea mays OTU-like cysteine protease family protein (LOC100279494), mRNA	NA	coding protein	psRNATarget
AY104840.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||=||||||||||||||=||| targets:1319   AAUCGACUCAAUACCAUUCAA   1339 Target Full Sequence	2.5	Zea mays PCO100726 mRNA sequence	NA	coding protein	psRNATarget
XM_020552941.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||=|||||||||||||||||= targets:2238   AAUCGACUCAAUACCAUCCAG   2258 Target Full Sequence	2.0	PREDICTED: Zea mays anthocyanidin 5,3-O-glucosyltransferase-like (LOC109946117), mRNA	NA	coding protein	psRNATarget
NM_001350737.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   |||=||||||||||||||=|| targets:4047   AACUGACUCAAUACCAUCUAA   4067 Target Full Sequence	2.5	Zea mays phospholipase D family protein (LOC100272416), mRNA	NA	coding protein	psRNATarget
EU970241.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||||||||||||||||*|||| targets:1117   AACCGACUCAAUACCAGCCAA   1137 Target Full Sequence	1.5	Zea mays clone 342550 mRNA sequence	NA	coding protein	psRNATarget
JB167578.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||=|||||||||||||*|||| targets:72   AAUCGACUCAAUACCACCCAA   92 Target Full Sequence	2.5	Sequence 5242 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239247.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||=|||||||||||||*|||| targets:72   AAUCGACUCAAUACCACCCAA   92 Target Full Sequence	2.5	Sequence 5242 from Patent EP2985353	NA	coding protein	psRNATarget
HI407117.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||=|||||||||||||*|||| targets:72   AAUCGACUCAAUACCACCCAA   92 Target Full Sequence	2.5	Sequence 5242 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020542630.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||*||||||||||=||||||| targets:5877   AAACGACUCAAUAUCAUCCAA   5897 Target Full Sequence	2.5	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542629.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||*||||||||||=||||||| targets:5939   AAACGACUCAAUAUCAUCCAA   5959 Target Full Sequence	2.5	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020542631.1	ncRNA:21   UUGGCUGAGUUAUGGUAGGUU   1   ||*||||||||||=||||||| targets:6354   AAACGACUCAAUAUCAUCCAA   6374 Target Full Sequence	2.5	PREDICTED: Zea mays protein Rf1, mitochondrial-like (LOC103635420), transcript variant X3, mRNA	NA	coding protein	psRNATarget