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BaseInfo

ncRNA ID	novel_zma_miR15221
Species	Zea mays
Class	miRNA
Genome position	Chr10:128241695-128241765 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	23
Mature sequence(if miRNA)	49 - CCUUCGGGAUUGGAGGGAAUUGA - 71
Stem-loop(if miRNA)	--C   CG          GA     A       UUA    CUU  GGAUUGGAGG  AUUGA GGGGAAA   G    |||  ||||||||||  ||||| |||||||    GAG  CCUAAUUUCU  UAAUU CCUCUUU   U GUA   AU          UC     -       UCU
Stem-loop sequence	CCUUCGGGAUUGGAGGGAAUUGAAGGGGAAAUUAGUUCUUUUCUCCUUAAUCUUCUUUAAUCCUAGAGAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008664337.2	ncRNA:23   AGUUAAGGGAGG-UUAGGGCUUCC   1   |=||||||||||-||||||||||| targets:2175   UUAAUUCCCUCCCAAUCCCGAAGG   2198 Target Full Sequence	3.0	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
EZ069159.1	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   *||||*||||=|||||||||||| targets:64   CCAAUCCCCUUCAAUCCCGAAGG   86 Target Full Sequence	2.5	TSA: Zea mays contig04794, mRNA sequence	NA	coding protein	psRNATarget
XM_020546797.1	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   |=||**||||||||||||||||| targets:5212   UUAACCCCCUCCAAUCCCGAAGG   5234 Target Full Sequence	2.0	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666766.2	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   |=||**||||||||||||||||| targets:5346   UUAACCCCCUCCAAUCCCGAAGG   5368 Target Full Sequence	2.0	PREDICTED: Zea mays protein TIFY 11d (LOC103643602), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069147.1	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   *|*=|||=|||||||||||=||| targets:1140   GCUGUUCUCUCCAAUCCCGGAGG   1162 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0210K18 mRNA, complete cds	NA	coding protein	psRNATarget
EU970776.1	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   *|*=|||=|||||||||||=||| targets:1154   GCUGUUCUCUCCAAUCCCGGAGG   1176 Target Full Sequence	2.5	Zea mays clone 350578 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001151304.1	ncRNA:23   AGUUAAGGGAGGUUAGGGCUUCC   1   *|*=|||=|||||||||||=||| targets:1154   GCUGUUCUCUCCAAUCCCGGAGG   1176 Target Full Sequence	2.5	Zea mays uncharacterized LOC100277841 (LOC100277841), mRNA	NA	coding protein	psRNATarget