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BaseInfo

ncRNA ID osa-miRf11118-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - UCAGCGCCAAGUGCAUUGGCGCUGA - NA
Stem-loop(if miRNA)   --AA  U            U  -A            -----CCCUGCC       GCCUCGCCCGCCACGCUGG
GC    GG GUCAGCGCCAAG GC  UUGGCGCUGAGG            ACAUCGC                   C
||    || |||||||||||| ||  ||||||||||||            |||||||                   G
CG    CC UAGUCGCGGUUU CG  AACCGCGACUCC            CGCGGUU                   C
  GCAG  -            -  CC            AACAAGAAUAGA       GCCCUGACCGCGACUGUAG
Stem-loop sequence GCAAGGUGUCAGCGCCAAGUGCAUUGGCGCUGAGGCCCUGCCACAUCGCGCCUCGCCCGCCACGCUGGCGCGAUGUCAGCGCCAGUCCCGUUGGCGCAGAUAAGAACAACCUCAGCGCCAACCGCUUUGGCGCUGAUCCGACGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288785.1
ncRNA:25   AGUCGCGGUUACGUGAACCGCGACU   1
  |||||||||=|||||*|||||||||
targets:238   UCAGCGCCAGUGCACCUGGCGCUGA   262

2.5 Oryza sativa Japonica Group cDNA, clone: J090069K17, full insert sequence NA coding protein psRNATarget
XM_015783144.1
ncRNA:25   AGUCGCGGUUACGUGAACCGCGACU   1
  |||||||||=|||||*|||||||||
targets:1115   UCAGCGCCAGUGCACCUGGCGCUGA   1139

2.5 PREDICTED: Oryza sativa Japonica Group YTH domain-containing protein 1-like (LOC107280970), mRNA YTH domain-containing protein 1-like(LOC107280970) coding protein psRNATarget