ncRNA ID | osa-miRf11118-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - UCAGCGCCAAGUGCAUUGGCGCUGA - NA |
Stem-loop(if miRNA) |
  --AA  U            U  -A            -----CCCUGCC       GCCUCGCCCGCCACGCUGG GC    GG GUCAGCGCCAAG GC  UUGGCGCUGAGG            ACAUCGC                   C ||    || |||||||||||| ||  ||||||||||||            |||||||                   G CG    CC UAGUCGCGGUUU CG  AACCGCGACUCC            CGCGGUU                   C   GCAG  -            -  CC            AACAAGAAUAGA       GCCCUGACCGCGACUGUAG |
Stem-loop sequence | GCAAGGUGUCAGCGCCAAGUGCAUUGGCGCUGAGGCCCUGCCACAUCGCGCCUCGCCCGCCACGCUGGCGCGAUGUCAGCGCCAGUCCCGUUGGCGCAGAUAAGAACAACCUCAGCGCCAACCGCUUUGGCGCUGAUCCGACGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288785.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090069K17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015783144.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group YTH domain-containing protein 1-like (LOC107280970), mRNA | YTH domain-containing protein 1-like(LOC107280970) | coding protein | psRNATarget |