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BaseInfo

ncRNA ID	novel_zma_miR15195
Species	Zea mays
Class	miRNA
Genome position	Chr9:81117909-81118012 [+]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	81 - ACCGGACAGUGUUUGGUGGCGCAC - 104
Stem-loop(if miRNA)	--  A       --           -   -CA       AAAGC      A  CGA   GC CCACCGG  ACUGUCCGGUG GCC   CAUGUCA     UCCAAC GU   A   || |||||||  ||||||||||| |||   |||||||     |||||| ||   C   CG GGUGGUU  UGACAGGCCAC CGG   GUACAGU     GGGUUG CA   C CA  C       UG           G   UCG       -----      G  AUC
Stem-loop sequence	GCACCACCGGACUGUCCGGUGGCCCACAUGUCAAAAGCUCCAACAGUCGAACCCUAACGGUUGGGUGACAUGGCUGGCGCACCGGACAGUGUUUGGUGGCGCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ065990.1	ncRNA:24   CACGCGGUGGUUUGUGACAGGCCA   1   ||||||||||==|||||||||||| targets:20   GUGCGCCACCGGACACUGUCCGGU   43 Target Full Sequence	2.5	TSA: Zea mays contig01624, mRNA sequence	NA	coding protein	psRNATarget
BT069074.2	ncRNA:24   CACGCGGUGGUUUGUGACAGGCCA   1   ||||||||||==|||||||||||| targets:436   GUGCGCCACCGGACACUGUCCGGU   459 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0158J22 mRNA, complete cds	NA	coding protein	psRNATarget
BT066461.2	ncRNA:24   CACGCGGUGGUUUGUGACAGGCCA   1   ||||*||||||=|||||||||||| targets:830   GUGCACCACCAGACACUGUCCGGU   853 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0008E18 mRNA, complete cds	NA	coding protein	psRNATarget
BT068112.2	ncRNA:24   CACGCGGUGGUUUGUGACAGGCCA   1   ||||*|||||==|||||||||||| targets:704   GUGCACCACCGGACACUGUCCGGU   727 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0045K13 mRNA, complete cds	NA	coding protein	psRNATarget
U41079.1	ncRNA:24   CACGCGGUGGUUUGUGACAGGCCA   1   ****|*||||=||||||||||||| targets:4   UAAAGGCACCGAACACUGUCCGGU   27 Target Full Sequence	2.0	Zea mays copia-type retroelement PREM-2, partial sequence	NA	coding protein	psRNATarget