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BaseInfo

ncRNA ID	novel_zma_miR15192
Species	Zea mays
Class	miRNA
Genome position	Chr9:19146103-19146163 [-]
Reference genome	RefGen_v4
Source	SRR2089707
Length	24
Mature sequence(if miRNA)	1 - GUUCGGUUACUAGUGGUUUGAGGG - 24
Stem-loop(if miRNA)	--     U     CC          -AU  U   UUCGA CCAUU  UGACCGAACA   CC U   ||||| |||||  ||||||||||   ||   GAGUU GGUGA  AUUGGCUUGU   GG A GG     U     UC          AAC  A
Stem-loop sequence	UUCGAUCCAUUCCUGACCGAACAAUCCUUAAGGCAAUGUUCGGUUACUAGUGGUUUGAGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU960473.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:114   CCCUCAAACCACUAGUAACCGAAC   137 Target Full Sequence	0.0	Zea mays clone 225209 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU963775.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:247   CCCUCAAACCACUAGUAACCGAAC   270 Target Full Sequence	0.0	Zea mays clone 272562 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU961196.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:389   CCCUCAAACCACUAGUAACCGAAC   412 Target Full Sequence	0.0	Zea mays clone 233383 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU964415.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:773   CCCUCAAACCACUAGUAACCGAAC   796 Target Full Sequence	0.0	Zea mays clone 278711 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001245881.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:773   CCCUCAAACCACUAGUAACCGAAC   796 Target Full Sequence	0.0	Zea mays hypothetical protein (LOC100276749), mRNA	NA	coding protein	psRNATarget
BT069598.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:868   CCCUCAAACCACUAGUAACCGAAC   891 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0180C20 mRNA, complete cds	NA	coding protein	psRNATarget
BT069064.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:836   CCCUCAAACCACUAGUAACCGAAC   859 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0160O17 mRNA, complete cds	NA	coding protein	psRNATarget
BT065224.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:819   CCCUCAAACCACUAGUAACCGAAC   842 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0046E21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150473.2	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:874   CCCUCAAACCACUAGUAACCGAAC   897 Target Full Sequence	0.0	Zea mays hypothetical protein (LOC100276749), mRNA	NA	coding protein	psRNATarget
BT062705.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:874   CCCUCAAACCACUAGUAACCGAAC   897 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0335N06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008678753.2	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||||||| targets:919   CCCUCAAACCACUAGUAACCGAAC   942 Target Full Sequence	0.0	PREDICTED: Zea mays hypothetical protein (LOC100276749), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB166498.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||=|||= targets:107   CCCUCAAACCACUAGUAACUGAAU   130 Target Full Sequence	2.5	Sequence 4162 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238167.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||=|||= targets:107   CCCUCAAACCACUAGUAACUGAAU   130 Target Full Sequence	2.5	Sequence 4162 from Patent EP2985353	NA	coding protein	psRNATarget
HI406037.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||=|||= targets:107   CCCUCAAACCACUAGUAACUGAAU   130 Target Full Sequence	2.5	Sequence 4162 from Patent EP2074227	NA	coding protein	psRNATarget
EU942334.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||=|||= targets:255   CCCUCAAACCACUAGUAACUGAAU   278 Target Full Sequence	2.5	Zea mays clone 1480331 mRNA sequence	NA	coding protein	psRNATarget
EU964521.1	ncRNA:24   GGGAGUUUGGUGAUCAUUGGCUUG   1   |||||||||||||||||||=|||= targets:935   CCCUCAAACCACUAGUAACUGAAU   958 Target Full Sequence	2.5	Zea mays clone 279503 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671191.2	ncRNA:23   GGAGUUUGGUGAUCAUUGGCUUG   1   =||||||||||||||||*||||| targets:1   UCUCAAACCACUAGUAAGCGAAC   23 Target Full Sequence	1.5	PREDICTED: Zea mays 60S ribosomal protein L3 (LOC103646454), mRNA	NA	coding protein	psRNATarget