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BaseInfo

ncRNA ID novel_zma_miR15186
Species Zea mays
Class miRNA
Genome position Chr1:197545806-197545847 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 20
Mature sequence(if miRNA) 23 - UGGCAGGAGGUAGGUAGCUU - 42
Stem-loop(if miRNA) --          -   GU   A
  GUUGCUUGCC CCU  GCC A
  |||||||||| |||  ||| A
  CGAUGGAUGG GGA  CGG C
UU          A   --   U
Stem-loop sequence GUUGCUUGCCCCUGUGCCAAACUGGCAGGAGGUAGGUAGCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT085563.2
ncRNA:20   UUCGAUGGAUGGAGGACGGU   1
  ||||||||||||||||||||
targets:475   AAGCUACCUACCUCCUGCCA   494

0.0 Zea mays full-length cDNA clone ZM_BFc0034D18 mRNA, complete cds NA coding protein psRNATarget
EU947918.1
ncRNA:20   UUCGAUGGAUGGAGGACGGU   1
  ||||||||||||||||||||
targets:1009   AAGCUACCUACCUCCUGCCA   1028

0.0 Zea mays clone 366228 mRNA sequence NA coding protein psRNATarget