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BaseInfo

ncRNA ID novel_zma_miR15185
Species Zea mays
Class miRNA
Genome position Chr9:5875258-5875344 [+]
Reference genome RefGen_v4
Source SRR1583943
Length 24
Mature sequence(if miRNA) 64 - AUCUAUGGUGGGAUUUAUUUCAUU - 87
Stem-loop(if miRNA) --    UUU            U    ------    G  A   G  U
  UGGA   AAUCUCACUAUG GAUU      GGGU UG CAU GA U
  ||||   |||||||||||| ||||      |||| || ||| || U
  ACUU   UUAGGGUGGUAU CUAA      UCCA AC GUG CU A
UU    UAU            -    AUUAGG    G  -   A  C
Stem-loop sequence UGGAUUUAAUCUCACUAUGUGAUUGGGUGUGACAUGGAUUUACUCAGUGCAGACCUGGAUUAAAUCUAUGGUGGGAUUUAUUUCAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001176110.1
ncRNA:24   UUACUUUAUUUAGGGUGGUAUCUA   1
  ||*|=|||||||||||||||=|||
targets:1512   AAGGGAAUAAAUCCCACCAUGGAU   1535

1.5 Zea mays uncharacterized LOC100383462 (LOC100383462), mRNA NA coding protein psRNATarget
BT067278.1
ncRNA:24   UUACUUUAUUUAGGGUGGUAUCUA   1
  ||*|=|||||||||||||||=|||
targets:1512   AAGGGAAUAAAUCCCACCAUGGAU   1535

1.5 Zea mays full-length cDNA clone ZM_BFb0367A16 mRNA, complete cds NA coding protein psRNATarget