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BaseInfo

ncRNA ID novel_zma_miR15184
Species Zea mays
Class miRNA
Genome position Chr1:191559997-191560163 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 144 - GUUCUUAACGUUAAGUUCGUCGGG - 167
Stem-loop(if miRNA) --  U         AUA                          ------------C GGAACAAAUUCAACGGCCCCCGUCGAACUUAA
  CG CGAACUUAA   UAAGAACGUGGGUGCCGUCGAACUUA             G                                A
  || |||||||||   ||||||||||||||||||||||||||             |                                A
  GC GCUUGAAUU   AUUCUUGCACCCAUGGCAGCUUGAAU             C                                A
GG  U         GCA                          UGUAAUUUUUGCA CCAUGGCAGCUUGAAUUGUAAUUCUUGCACCC
Stem-loop sequence CGUCGAACUUAAAUAUAAGAACGUGGGUGCCGUCGAACUUACGGGAACAAAUUCAACGGCCCCCGUCGAACUUAAAAACCCACGUUCUUAAUGUUAAGUUCGACGGUACCCACGUUUUUAAUGUUAAGUUCGACGGUACCCACGUUCUUAACGUUAAGUUCGUCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167143.1
ncRNA:24   GGGCUGCUUGAAUUGCAAUUCUUG   1
  ||||*|||||||||*|||||||||
targets:6   CCCGUCGAACUUAAGGUUAAGAAC   29

1.5 Sequence 4807 from Patent EP2559767 NA coding protein psRNATarget
HI406682.1
ncRNA:24   GGGCUGCUUGAAUUGCAAUUCUUG   1
  ||||*|||||||||*|||||||||
targets:6   CCCGUCGAACUUAAGGUUAAGAAC   29

1.5 Sequence 4807 from Patent EP2074227 NA coding protein psRNATarget
LQ238812.1
ncRNA:24   GGGCUGCUUGAAUUGCAAUUCUUG   1
  ||||*|||||||||*|||||||||
targets:6   CCCGUCGAACUUAAGGUUAAGAAC   29

1.5 Sequence 4807 from Patent EP2985353 NA coding protein psRNATarget