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BaseInfo

ncRNA ID novel_zma_miR15183
Species Zea mays
Class miRNA
Genome position Chr8:118163619-118163692 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 1 - ACGGUGUAAAAGGUGUUUUGGCGA - 24
Stem-loop(if miRNA) --  G        -        -  CG     AUAUAC
  AC GUGUAAAA GGUGUUUU GG  ACUAU      A
  || |||||||| |||||||| ||  |||||
  UG CACAUUUU UCACAAAA UC  UGGUA      U
UU  G        A        A  AU     CCACGU
Stem-loop sequence ACGGUGUAAAAGGUGUUUUGGCGACUAUAUAUACAUUGCACCAUGGUUACUAAAAACACUAUUUUACACGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ052544.1
ncRNA:24   AGCGGUUUUGUGG-AAAAUGUGGCA   1
  *=**|||||||||-|||||||||||
targets:39   GUCACAAAACACCGUUUUACACCGU   63

3.0 TSA: Zea mays contig53665, mRNA sequence NA coding protein psRNATarget