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BaseInfo

ncRNA ID novel_zma_miR15181
Species Zea mays
Class miRNA
Genome position Chr8:9545733-9545807 [+]
Reference genome RefGen_v4
Source SRR2089707
Length 24
Mature sequence(if miRNA) 52 - CUGUAGACUGUCUGGUGUGCCCAU - 75
Stem-loop(if miRNA) -- U   U          -    U    G    C  AUG
  G GGC CACCGGACAG CUAC GUGC CUGU CG   U
  | ||| |||||||||| |||| |||| |||| ||
  C CCG GUGGUCUGUC GAUG CACG GACA GC   G
UA -   U          A    U    -    U  CAC
Stem-loop sequence GUGGCUCACCGGACAGCUACUGUGCGCUGUCCGAUGUGCACCGUACAGGCACUGUAGACUGUCUGGUGUGCCCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU970212.1
ncRNA:24   UACCCGUGUGGUCUGUCAGAUGUC   1
  =**|||=||||=||||||||||||
targets:609   GAAGGCGCACCGGACAGUCUACAG   632

2.5 Zea mays clone 342257 hypothetical protein mRNA, complete cds NA coding protein psRNATarget